Pseudomonas qingdaonensis: KH389_12710
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Entry
KH389_12710 CDS
T07622
Name
(GenBank) autotransporter domain-containing protein
Organism
pqi
Pseudomonas qingdaonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
TIG
Cadherin_5
Y_Y_Y
SprB
Motif
Other DBs
NCBI-ProteinID:
QVL21388
LinkDB
All DBs
Position
complement(2786714..2791987)
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AA seq
1757 aa
AA seq
DB search
MNRSLIDLRHRMARSIALLGLMLVSLLLCGQASAAPTLSPASGTALPDVAVNTPIDTFTI
TATGGAMPIFEWYECDQDDTSMPTNCLPPGLVLETSPGSATTTLHGTPTAIGNYDFWISA
LDSNDVVGKARYTLKVTGATPPLTLTAVSPGSGPAIGGTSVTLTGTNFVGVTDVTFAGVP
ATNIIVVSPTSITATVPAYTAGPVNVTVTTASGTSTLTNGFTYLAVPTLTIATPNSGATT
GGNQVFISGTGLTGTTSLTFGGTPASSFTVNSSTSITAIAPAHAAGPVNVVATTPGGSAT
SVNAYTYLAVPTLNTVTPNSGPIGGGTSVTLTGTGLTGASSVTFGGVSATGWTINSPTQI
TATIPAGNAGVVNVSVTTAAGSASLTNAFTYIAPPVAGPVSASVGHNSSANPVTLSLSGG
VASSVAISTSASHGTVTASGTSVTYTPTVGYAGTDSFTYTATNSAGTSAPATVTVTVGSP
TISIAPASLPAGTAGIAYSTTSLAASGGNAPYAFSLASGALPSGLTLASNGTLSGTPTSS
GNFSFTARATDAFSYTGTRSYTLTIVAGSMAITPATLPAPIYSSSYSQQLTVSGGVAPYT
FSINGGSLPTGIALSSTGTLTGSPSSPGTYTFSVTAVDSSSNLTSVSQSYTLTIATPFID
ITPITLPAATVGTGYSTSISASGGVAPFDYGIAFGALPAGMSLTSTGTLSGTPTTAGTFT
FGVRASDTNRFTGVRPYSFVVGQQAPVAANINQTLAANSGASTISASLSGGPTTSLAVVT
PPAHGTVSITGATGFTYTPTPGYAGIDSFTYTATGPGGTSAPATVNLAITPPTVVIGTTT
LANATQNVPYTASISASGGTAPYSYTIVSGALPSGMALAPTGSLTGTPTAPGTTSFTVRV
TDSQSFQASQALSLTVVAQAPVVGNVSASVAANTSNNPLTLNLGSAPVTSVAVASNPQHG
TAQVSGTSITYTPTAGYSGIDSFTYTATGPGGTSAPATVNVTVTPPTLVLSPASGSLPPG
TVGTAYSFGLGASGGMAPYSYAIGGSLPNGLTLNTSTGVISGTPTEAANATLTVTATDAN
GATGSRTLSLTVVAQAPVVGNVSAGVAANSRNNPLTLSLGSAPVTSVAVASNPQHGTAQV
SGTRISYTPTAGYSGIDSFTYTATGPGGTSAAATVSLTITPPTLVMSPASGPLPPGTVGS
AYSFGLGASGGMAPYSYAIGAGSLPNGLQLDPATGVISGTPTEAANATLTVTATDANGAT
GSRSITLAIAAQVVTVVSSSEALSPGAVASVDLTRGATGGPFLRARVLSLSPASAGHASL
TSMAPARAARAALSGFNLRFVPAAAFAGTAVVTFSLESTSGASATGTVTFSVQARPDPSK
DAEVIGLLNAQSRAADRFASTQMDNFNRRLEQLHRPTCDRNSFNANVQHGRDNLGLGSLG
KALRDELEGNGKGNDDEDADDTRRKQRDTARATSGECVEEAVAYWTDGFINTGSNHARGA
KDNSFVTYGLSAGVDYRLSPRAVVGIGFGYGNDRADIGERDTRSEADALGLAAYLSVNPL
SEIYIDALLGYNRIRFDSRRYVTADPSNGYAHGSRDADQLFASLTASYEYREGALSLAPY
TRLNASFTKLDDFSERGGGIYGLSYEQQRQRSFTSFLGVRSGYDIQTGAGVLTPRVGLAW
GHNFSHSDDYRMRYTDQTNDGVLYRLSPDPMDSNFVDLDLGLDFSLSQSWRLGFSYKTAL
ATDERNEMFRIGLDGRF
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatccctgattgaccttcgtcaccgcatggcccgcagcattgcattgctgggc
ctgatgctcgtctcgctgctgctgtgcggccaggccagtgccgccccgaccctttccccc
gccagtggcaccgccctgccggatgtggcggtcaacacaccgatagacactttcactatc
accgccaccggcggcgccatgccgatcttcgagtggtacgaatgtgaccaggatgacacc
agcatgccgaccaactgcctgccgcccggtctggttctggaaacgtcgcctggaagtgcg
accaccaccctgcatggcacccccacagccatcggcaactacgatttctggatttcggcc
cttgacagcaacgacgtcgtgggcaaggcccgttacaccctcaaggtcacaggcgcaaca
ccgcccctgaccctgaccgccgtatcgcccggcagcggccccgccatcggcggcacctct
gtgaccctgaccggcaccaattttgtcggtgtcaccgacgtgacattcgctggtgtgccc
gctaccaacatcatcgtcgtttccccgacctcgataaccgccaccgtccccgcctacacg
gcaggcccggtcaacgtgacggtcacaacggcaagcggtacgagcacgctgaccaatggt
ttcacctacctcgccgtaccgaccctgaccatcgctacgcccaattccggcgccaccacc
ggcggcaatcaagtgtttatctcaggcacaggcctgaccggcaccaccagcctcaccttt
ggcggcacaccggcaagcagcttcaccgtcaacagttcgacatcgatcaccgccattgcg
cccgcgcatgccgccgggcccgtcaatgtcgtggccaccacgccggggggcagtgccact
tcggtcaatgcctatacctacctcgccgtgccgaccctgaacaccgtcacccccaactca
ggccccatcggcggtggcaccagcgtgaccctcacgggcaccggcctgaccggcgccagc
agcgtcacctttggtggggtatcggcaaccggctggaccatcaacagccccacccagatc
accgccacaatcccggccggcaacgccggcgtggtcaacgtgagtgtcaccactgccgcc
ggctcggcgtcgttgaccaatgccttcacctacattgcaccgccggttgccggcccggtc
agcgcctctgtcggccacaacagcagcgcgaaccctgtcacactcagcctctcggggggc
gtcgccagcagcgtggccatcagtacctcagcaagccacggcacagtaacggccagcggc
accagcgtcacctacacacccacggtcggttatgcaggcacggacagcttcacctatacc
gccaccaacagtgcaggcacctctgccccggcgaccgtgaccgttaccgtcggttccccg
accatcagcatcgcccctgcatcactgcctgcgggtactgccggtatcgcctacagcacc
acctcgctggctgccagcgggggtaacgcgccctacgccttttcgcttgcatctggagcc
ttgcccagcggcctgaccctggcatccaacggcacgctcagcggcacgccgaccagcagc
ggcaacttcagcttcacggccagggccaccgacgcgttcagctacaccggcacgcgcagc
tatacactgaccatcgttgccggcagcatggccatcaccccggcgacattgccagccccc
atttacagcagcagctacagccaacagctcaccgtcagtgggggtgtcgcgccctacacc
ttcagcatcaacggtggcagcctaccgaccggaatcgccctttccagtaccggtaccctg
accggaagcccctccagccccggtacttacaccttcagcgtcactgcggtcgacagctcc
agcaacctcaccagcgtcagtcagtcctataccctcaccattgccacgcccttcatagac
atcacgccgattaccttgcccgcagctacggtgggcacggggtacagcacgtcgatcagc
gccagcggtggggttgcacccttcgactacggtatcgccttcggcgcgctgcctgcagga
atgagccttaccagcacaggcaccctgagtggcacaccaaccaccgccggtacgttcact
ttcggggtgcgggccagtgataccaacagattcaccggagtgcgtccctattccttcgtg
gttggccagcaagcgccggtagccgccaatatcaaccaaaccctcgcagccaacagcggc
gccagcacgatcagcgcaagcctcagcggggggccgaccaccagcctggccgtggtgaca
ccccctgcacatggcaccgtcagcatcaccggggccacgggtttcacctataccccgacc
ccaggctatgccggcatcgacagctttacctataccgccaccggcccgggggggacttcg
gcgcctgcaaccgtcaacctcgccatcacgccacccaccgtggttatcggcacgaccaca
ctggccaacgccacccagaacgtgccctacacggccagcatcagtgccagtggcggcacc
gcgccgtacagctacaccatcgtttcgggcgccctgccgtccggcatggccctggccccg
accggcagcctgaccggtacgccaaccgcacccggcaccaccagcttcaccgtcagggtg
actgacagccagagtttccaggcaagccaggcgctgagcctgacagtcgtggcgcaggcg
cccgtggtcggcaacgtgtcggccagtgtggccgccaacaccagcaacaacccgctgacc
ctgaacctgggcagtgccccggtcaccagcgtggccgtggccagcaacccacagcacggt
actgcgcaggtcagtggcaccagcatcacctacaccccgactgccggttactcgggcatt
gacagcttcacctacaccgccaccggcccgggcggcacctcggcacctgccacggtgaac
gttaccgttaccccgccaaccctggtgctaagcccagcgtcaggctcgctgccgccaggc
accgtgggcaccgcctacagcttcggcctgggtgccagcggcgggatggcgccgtacagc
tatgccatcggcggcagtctgcccaatgggttgacactcaacacctcgaccggggtgatc
agcggcacgccgaccgaggccgccaacgccacgctgaccgttaccgccaccgatgccaac
ggtgccaccggcagccgtacgctgagcctgacagtcgtggcacaggcgcccgtggtcggc
aacgtgtcggccggtgtggccgccaacagccgcaacaacccgctgaccctgagcctgggc
agtgccccggtcacaagcgtggccgtggccagcaacccacagcacggtactgcgcaggtc
agtggcacccgcatcagctacaccccgactgccggttactcgggcattgacagcttcacc
tacaccgccaccggcccgggcggcacctcggcagccgccacggtgagcctcaccatcacc
ccaccgacgctggtaatgagcccggcctccggcccactgccgccaggcaccgtgggcagc
gcctacagcttcggcctgggtgccagcggcgggatggcgccgtacagctacgccatcggc
gccggcagcctgcccaatggcctgcagctcgacccggcgaccggggtgatcagcggcacg
ccgaccgaggccgccaacgccacgctgaccgttaccgccaccgatgccaacggcgccacc
ggcagccgcagcattaccctggcgatcgccgcccaggtggtcaccgtggtgtcatccagc
gaggcgctcagccccggtgctgtcgccagcgtcgaccttacccgtggggccaccggaggg
ccgttcctgcgcgcccgcgtgctgtcgttgagcccagcgtcagccgggcatgccagcctg
acatcgatggcccctgcgcgagcagcgcgtgccgccctgtccggtttcaacctgcgcttc
gtgcctgccgctgcctttgccggcacagcagtggtcaccttcagcctggagagcaccagc
ggtgccagcgcgaccggcaccgtgaccttcagcgtgcaggcacgtcccgaccccagcaag
gacgccgaagtgatcggcctgctcaacgcgcaatcgcgcgcagcggatcgttttgccagc
acccagatggacaacttcaaccggcgcctggagcaactgcaccgccctacctgtgaccgc
aactcgttcaacgccaacgttcaacatggccgcgacaacctcggcctgggcagcctgggc
aaggcgctgcgcgacgagctcgaaggcaacggcaagggcaatgacgacgaggacgcggac
gacacccgtcgcaagcagcgcgacaccgcccgcgccacctcaggcgagtgcgtcgaagag
gccgtggcctactggaccgatggcttcatcaacaccggttccaaccacgcacgcggcgcc
aaggacaacagcttcgtcacctacggactgagcgccggcgtcgactatcgcctgtcgcca
agggccgtggtgggcatcggttttggctacggcaacgaccgcgccgacatcggcgagcgg
gacacccgcagcgaggccgacgccctgggcctggcggcgtacctgagcgtcaacccgctg
tcggagatctacatcgatgcactgctgggctacaaccgcatccgcttcgactcgcgccgc
tacgtcactgccgacccgtccaacggctatgcccatggctcgcgcgacgccgaccagctg
ttcgcctcgctgaccgccagctacgagtaccgcgaaggcgccctgtcgctggcgccgtac
acacggctgaatgccagcttcaccaagctggacgacttcagcgaacggggcggcggtatc
tacgggctgtcgtacgaacaacagcgccagcggtccttcacctcgttcctgggcgtgcgc
agcggctacgacatccagaccggcgccggcgtgctcacgccgcgggtcgggctggcgtgg
ggtcacaacttcagccacagcgacgactaccgcatgcgctacaccgaccagaccaacgac
ggcgtgctgtatcgcctgtcacccgacccgatggacagcaacttcgtcgacctggacctg
ggcctggacttcagcctcagccagagctggcgcctgggcttctcgtacaagaccgcgctg
gccaccgacgagcgcaacgagatgttccgcatcggcctggacgggcgcttctga
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