Pseudomonas qingdaonensis: KH389_20060
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Entry
KH389_20060 CDS
T07622
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pqi03009
]
KH389_20060
03016 Transfer RNA biogenesis [BR:
pqi03016
]
KH389_20060
Enzymes [BR:
pqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
KH389_20060
5.4.99.29 23S rRNA pseudouridine746 synthase
KH389_20060
Ribosome biogenesis [BR:
pqi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KH389_20060
Transfer RNA biogenesis [BR:
pqi03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
KH389_20060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QVL17667
LinkDB
All DBs
Position
4405624..4406259
Genome browser
AA seq
211 aa
AA seq
DB search
MPLSNVHILHQDAAILVVNKPTLLLSVPGRADDNKDCLITRLQENGYPDALIVHRLDWET
SGIILLARDADSHRELSRQFHDRETEKAYTALCWGQPALDSGSIDLPLRYDPPTKPRHVV
DHEQGKHALTFWRIVERCGDHCRVELTPITGRSHQLRVHMLSIGHPLLGDRLYAYPEALA
AHERLCLHASMLSFTHPVSGERLRFECPAPF
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgtccaacgttcacatccttcaccaggatgccgccatcctggtggtcaacaag
ccgaccctgctgctgtccgtgccggggcgcgccgacgacaacaaggattgcctgatcacc
cgcctgcaggaaaacggctaccccgacgccctgatcgtgcaccgtctggattgggaaacc
tcggggatcatcctgctggcgcgcgacgccgacagccaccgcgagctgtcgcgccagttc
catgaccgtgaaaccgagaaggcctacaccgcactgtgctggggccagcctgcgctggac
agcggcagcatcgacctgccgttgcgctacgacccgcccaccaagccacggcacgtggtg
gaccacgagcagggcaagcatgcgttgaccttctggcgcatcgtcgagcgctgtggcgat
cattgccgggtggagctcacgccgattaccgggcgttcgcaccagttgcgcgtgcacatg
ctgtcgatcgggcatccgctgctgggggatcgactgtacgcctaccccgaggccctggca
gcgcatgagcggttgtgtctgcatgccagcatgctgagcttcacccacccggtgagcggc
gagcgactgcgcttcgagtgcccggcgccgttctga
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integrated database retrieval system
