Pectobacterium quasiaquaticum: IG609_013640
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Entry
IG609_013640 CDS
T08268
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu00521
Streptomycin biosynthesis
pqu00523
Polyketide sugar unit biosynthesis
pqu00541
O-Antigen nucleotide sugar biosynthesis
pqu01100
Metabolic pathways
pqu01110
Biosynthesis of secondary metabolites
pqu01250
Biosynthesis of nucleotide sugars
Module
pqu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
IG609_013640 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IG609_013640 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IG609_013640 (rfbC)
Enzymes [BR:
pqu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IG609_013640 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
URG47848
UniProt:
A0A9Q2ET93
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All DBs
Position
complement(2976196..2976741)
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AA seq
181 aa
AA seq
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MKIIDTRIPDLKIIEPDVFGDDRGFFFESFNQNKFEEGIGFSVNFVQDNHSKSTKGVLRG
LHYQLAPHAQGKLVRCVEGEVFDVAVDIRKSSSTFGQWVGVHLSAENKRQFWIPEGFAHG
FVTLSESAEFLYKTTNYYAPQSERSIRWNDQDLNIVWPLRTVLLSEKDKNASFIKNTDCF
K
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcattgatacaagaataccagatcttaaaattatagagcctgacgttttcggt
gatgatagaggttttttctttgagagttttaaccagaataaattcgaagaaggtataggt
ttttcagttaattttgtacaggataatcactctaagtcaactaagggggttcttagagga
ttacactatcaactagcaccacacgcacaaggtaagttggtcagatgcgttgagggagag
gttttcgatgtggcagtagatatccgtaagtcgtcttcaacttttggtcagtgggtcgga
gttcacttatctgcagaaaataagcgtcagttctggatacccgaaggatttgctcatgga
ttcgttacactgagtgagtcggctgagtttctttataagactacaaattattatgctcct
caaagtgaaagaagcattagatggaatgatcaagacttaaatatagtttggcctctaaga
actgttctattatctgaaaaagacaaaaatgcatctttcataaagaatacggattgcttt
aaatag
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