Cutibacterium avidum: PALO_04490
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Entry
PALO_04490 CDS
T02632
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pra
Cutibacterium avidum
Pathway
pra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PALO_04490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_04490
Enzymes [BR:
pra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PALO_04490
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PALO_04490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
Helicase_RecD
SLFN-g3_helicase
SH3_13
PhoH
UvrD_C
AAA_25
nSTAND3
FtsK_SpoIIIE
T2SSE
CbiA
AAA_16
UvrB
Motif
Other DBs
NCBI-ProteinID:
AGJ77508
LinkDB
All DBs
Position
complement(987095..988963)
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AA seq
622 aa
AA seq
DB search
MPELVPVGAGTRLEPFARAGVLEPSDIHLANLVCRIGEEHNADVSLAIALSCRELRRGSV
FWDPHEIAESIRRQVLDPAIPDINDSEQAALFDDLEWPEPREWLSALAESPIIAGRGDPL
NQLPARLDDGLLYLEKYWQAEHDVARDLASLAADPPSQGPVPAEQIVSEVSAALASSGIT
LDPAQAQAAVAAITHRISVLAGGPGTGKTTTVCTLLASLQKADPHLGAIALAAPSGKAAA
RLRDSVSEVSERMPDDLSPIVADATTVHSLLKWQGPGTSFGYDEQHQLPFGVVVVDEASM
LSLPLAASLLAAIGTGTRLILVGDPGQLVSVDAGSVLADIVSSAGTLDTRLPVTILTRNH
RSRGDIADLSEAVREGAKETALEVLTRSQPDHDASRPSSVLPSISWIDADPANITMADLP
AVADVIAQTGSQMLELARSGSDAAALKLVDGHRLLCAHREGPYGVDEWSQRMVSVLADVL
PGVDQSRWALGETAMVTHNLAQLGVNNGDCGVVVETRPVPTVALPGPGGAPRRLPCSLIP
SLQPLQAMTIHKAQGSQFTNVTVILPPPDSPLLTRELFYTAITRAREHLTVVGMKESVER
AIDRTNDRRSGIQRRWEETRSL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactcgtaccggtcggagccggaaccaggttggagcccttcgcccgcgccggt
gttctcgaaccaagcgacatccaccttgccaacctggtgtgccgtatcggcgaggagcac
aacgctgacgtcagtttggccattgcgttgtcgtgtcgtgagctgcgtcgagggtcggtg
ttctgggacccccacgagatcgccgagtccatccgacgtcaggttctcgacccagccatc
ccggacatcaacgacagcgagcaggctgcgctctttgacgacttggaatggcccgaaccg
agagaatggctgtctgcccttgcggagagccccatcatcgcgggccgtggtgatccactc
aaccaattgccggctcgcttggacgatggcctgctctaccttgagaagtactggcaggct
gagcacgatgtcgctcgcgatttggcctcactcgccgcagacccccccagccagggaccc
gtgcccgccgagcagatcgtgtcagaggtcagcgctgctcttgcatcctccggaatcacg
ttggatccggctcaggcccaggctgctgttgccgccatcactcacaggatcagtgttctt
gctggtggacctggaacaggcaagacgacgacagtgtgcaccctcctggcatcacttcag
aaggcggatcctcacctcggtgccattgccctcgcggcccccagcggcaaagcagcggcc
cgacttcgcgactcggtgtcagaggtatcagagcgcatgcctgacgatctcagccccatc
gtcgctgatgccacgaccgtccattccctcttgaagtggcaggggccagggacatccttt
ggctacgacgagcagcaccagcttcccttcggagtggtcgtcgtcgacgaggcgtccatg
ctctccctcccactggcggccagcctcctcgccgctattgggaccgggactcgcctcatc
ctggtgggagacccgggccagctcgtctcggtggacgccggaagtgttctggcagacatt
gtgtcgtcagccggcaccctcgatacacgtctgcctgtcacgatcctcactcgcaaccac
cggtcgcgaggcgacatcgcggatctgtcggaagccgttcgtgagggcgccaaggaaacc
gctttggaggtgctcaccaggtctcagcccgaccatgatgcgtcaaggccgagctccgtc
ctgccgagcatttcctggatcgacgccgatcccgccaatatcaccatggctgaccttcca
gctgtcgcggacgtcatcgcacagacgggatcgcagatgctcgagctggcccggtcaggc
tccgacgccgctgccctcaaactcgtggatggccatcgcttgctgtgcgcccatcgggaa
ggaccatatggcgtcgacgagtggtcgcaacgcatggtttctgtcctcgccgatgtcctt
cccggagtcgatcagagccgatgggcgctcggtgaaactgccatggtcacacacaatctc
gctcagctgggcgtgaacaatggcgactgtggagttgtcgtggagacgcgacctgttccg
accgtagctcttcccggacctggcggggcccctcggcgcttgccctgttccctcatccca
tctctgcaacctctgcaggcgatgacgatccacaaggcccagggcagtcagttcaccaat
gtcacggtgatcttgccgcccccggattccccgctcctcacccgtgagttgttctacacg
gcgattactcgtgctcgtgagcacctcacggttgtcgggatgaaggagtccgtggagcgg
gccattgatcggaccaatgaccgccggtctggtatccagcgtcggtgggaggagactcgc
tcactgtga
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