Podarcis raffonei (Aeolian wall lizard): 128399747
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Entry
128399747 CDS
T09310
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04217
Necroptosis
praf04622
RIG-I-like receptor signaling pathway
praf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128399747
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128399747
04625 C-type lectin receptor signaling pathway
128399747
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128399747
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128399747
Enzymes [BR:
praf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128399747
Peptidases and inhibitors [BR:
praf01002
]
Cysteine peptidases
Family C67
128399747
Ubiquitin system [BR:
praf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128399747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
TraC_F_IV
Ribosomal_L19
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
128399747
NCBI-ProteinID:
XP_053217436
LinkDB
All DBs
Position
13:complement(43698095..43718826)
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AA seq
893 aa
AA seq
DB search
MRLKKLSHRLQAIDLSLTSAAAMKPRQLLIAVKSFAGPSKAGREVKVARGSLLCLEDGRG
ASPDGTFWVRVMDTEKVVLLPPRVAVELTGACSGLLEAVTNGDERLALFKKEQLMQRLSA
LREGDQVRVQITSASGKKVRGIIRYRGPIDKSKHNTSIIFGVELVGSAAGKGFTDGTFKG
HKFFSCRENCGVFVPVNRIDPDDLPEGSPPAPPRGSVRECTRIQLTTGDPLSTPELEIGD
RVFFKMDDSTPTGTVVYCDYLPKKQETGVFVGIHLDKPVGSWDGLFRNRVLCHIPSPEYG
MLLPISKVHKEQADRIPETLPSNSSSPTSDEFEDCPSPSSIKYPPKLEECSPKEPLSLAP
SRELGDHKTKELGVLKKKKNGEEEEEEDEEEEDKEEEEDKQYNHHLLEINSVVEVNDPPI
YGVIRWIGEPPDEDEAIAGLELEEPLPSGCTDGQYRGTRYFHCQPNKALFVKLRHCRPDS
RFGSLQNLENPVLRCNPLDFRGYASSRVEEDTPPPPLGDQGMEHLSGWKKGIQGHCNSCY
LDATLFCMFTFTSVLDSMLLRPADKNDGPSYTETRDLLRTEIVNPLRKNGYVCATKIMAL
RKVLETAGHSSGFTHEEKDPEEFLTLLFRVLKMEPLFQIRSAGQDPHGCIFYQIFIEDHL
TRAVPTVQELLEGSLVTGDLKFTEAPSCLILQMPRNGKNFKAFRTIQPSLELDLTDLLED
SPRECCICQGLAVTECPDCYRDHSFGAHHIKQFCKLCSQQVHKHRARRSHQPRPLHLPEE
LSRLGSLPDFIPRQTMQLFGVLCIETSHYVAFTRHGPDVHQWLFFDSMADREGGLNGFNI
PQVTPCSEVADYLAMPPEALQGLDPKSLPPYVRRLLCDAYMCFYHSPSLGLYK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgaaaaagttaagtcaccgcctccaggcaattgatttgtctctcacctctgca
gcagcaatgaagccccggcaactcttaattgctgtgaaaagttttgcggggcccagcaag
gcagggcgggaggtcaaggtggccagaggcagcctgctgtgcctagaggatggccgtggg
gcatcgccagacggaactttctgggtcagggtcatggatacggagaaagtggttctgctg
cctccacgggtagccgtggaactgacgggcgcctgttctggactcctagaagctgtgacc
aacggagatgagcgccttgcgctgttcaagaaggagcagttgatgcagcggctcagcgcc
ctccgggagggagaccaagtcagggtccagatcacttccgcctccgggaagaaagttcga
ggcatcattcgataccgtgggcccatagacaagagcaagcacaataccagcatcatcttt
ggcgttgagcttgtgggctcagcagccgggaagggtttcaccgacggcactttcaaaggc
cacaagttcttctcctgccgggagaactgtggagtctttgtccctgtaaaccggattgat
ccggatgacttgcccgaaggcagcccaccggcgcccccgagaggcagcgtccgggaatgc
acgcggatccagctgacgacgggagatcccttgtcgactccggaactggagattggggac
cgtgttttcttcaagatggatgacagcacccccaccggcacggtggtgtactgcgactac
ctccccaagaaacaggagactggggtgttcgtggggatacacttggataaaccggtcggg
tcctgggatggcctcttcagaaaccgtgtcctgtgccatatcccatctcctgagtatggt
atgctcctgcccatctctaaagtacacaaagaacaagctgacagaatccctgagactttg
cccagcaattcctcttcacccacctcagatgaatttgaagattgtccgtccccctcatct
atcaagtatccccccaaactggaagagtgctcgcccaaggagcccctaagcttggctcct
tccagagaactgggggaccacaagacaaaagaattgggagttttgaagaagaagaaaaat
ggggaggaggaagaggaagaagatgaggaggaggaagacaaagaggaagaggaggacaag
cagtataaccaccacctcttggagatcaattccgtggtggaggtgaacgatccgccaatc
tacggggtgatccgatggatcggggagccccctgatgaggatgaagctattgctgggctg
gagctggaggaaccgctgccttcgggatgcacggacggccagtacagagggacccgctac
ttccactgccaacccaacaaagcactcttcgtcaagctgcgccactgtcgtcccgactcg
cgcttcggctctctgcagaatctggagaaccctgttttgcgttgcaatcccttggacttc
cgtgggtacgccagcagcagagtggaagaggacacgccaccgccaccgctaggtgaccag
ggcatggagcatctctcaggatggaagaaggggatccaaggccactgcaactcctgctac
ctggatgccactctcttctgtatgttcacttttacctcagtgctggattcaatgctgctg
cgcccagcagacaagaacgatggtccgtcttacactgaaacacgggatctgctgagaacg
gagattgtcaaccctttgcgcaagaatggatatgtctgtgccaccaaaattatggccttg
cggaaggttctggagacggctggacattcctctggcttcacccatgaagaaaaagaccca
gaggaatttctcaccctgctcttccgagtgttgaaaatggagccactcttccagattcgc
tctgctggtcaggacccccacggctgcattttctaccagatatttattgaggatcacctg
acccgggcagtgcccacggttcaggagcttctggaggggtctctggtcactggggacctc
aagttcacagaggccccctcttgcctcatcctgcagatgccgcggaatgggaagaacttc
aaggcctttcgcaccatacagcccagcctggaacttgacctgactgaccttctggaagac
agccctcgggagtgctgcatttgccaagggctggctgtgactgagtgtccggattgctac
cgggaccacagctttggcgctcaccacatcaagcagttctgcaagctttgcagtcagcag
gtccacaaacaccgtgcccggcgcagccaccaacctcgcccgctgcatctccccgaggag
ctttcccgcttgggctccttgcctgacttcatcccccgccagaccatgcagctcttcggc
gtcctttgcatcgagaccagccactacgtagcgtttacccgccatggcccagatgtccac
cagtggctcttctttgacagtatggctgaccgtgagggtgggctgaatggctttaacatt
ccccaagtcacgccctgctcggaagtagcggactatttggcaatgccccctgaggcgctc
caaggcctggatcccaaatccttgcccccttatgtccgccggctgctttgtgatgcctac
atgtgcttctaccacagcccttcccttggcctgtacaaataa
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