Podarcis raffonei (Aeolian wall lizard): 128400422
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Entry
128400422 CDS
T09310
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128400422
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128400422
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128400422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_4
PQQ_2
Motif
Other DBs
NCBI-GeneID:
128400422
NCBI-ProteinID:
XP_053218581
LinkDB
All DBs
Position
13:55394786..55398709
Genome browser
AA seq
757 aa
AA seq
DB search
MAAKAPSLSEALTSGFLTCTICLERLRRPKILPCLHSYCQECLRKLAGGRKELQCPECRE
RVALPEGGVGALRTNFFINGLLDLVRPTGEAEPTCSLCPLIGQETSQPAVSHCLDCADDM
CQDCASGHRCSRLTHLHRVVAMKDYLSGEHDEEIRKRQALQCKEHTGEELRFFCTPCAVV
LCRECRLGAHLQHPCLPLAEAAQARRPVIVELLAGVEETVQVIRTGRASLEREAARLQVR
EASIRDAVEQACSRAVQRLLAQQEEVLAQLADYVKERQKACQALCSDLEFQEQVASSTVA
FAQKVLSLGREVEIVSLEQVICERLRHLQGFSWEPLATRLPCLEVDAEIEGSGPRLFHLE
FREESPTGVPESPQEAATKGAKKKTHLPEGPQEEATKGAKKETHLPEGPQEEATKGAKKE
THLPCLEVNAEIPTGVPEGHKKAATKGAKKKRRKQQQQVPPVKEGFHMTTLILRGCQQAV
APVPPPKVPGTPLLTPKPLFSCSFCVKSPSDQKCPLVTGLCPFGSGELLVADNQNKNLKR
FSLQGEFKGTVPVPSGVAPVSVATVGSKVAFTAGSCLYLLNAEGELVWQKALGQGQASHA
VAALGGDRVAVCVAGQLEVYDLEGRLLEKIVPEGSAERCLVFLANHKDGFVGSDWYHRSV
VLFTRTGQLVAECSEEQLGECQPGGVCADVMGIIYVVLRELNKVVAFSPRGEKLGAFLAA
KNSINRPRVVTVVGKRRFAVALSNGTVHIFRIRYQGK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggccccgtccctctccgaagccctcaccagcggcttcctgacctgcacc
atctgcctggagcgcctccgccgccccaagatccttccctgcctgcacagctactgccag
gagtgcctgcggaagttggcagggggccggaaggagcttcagtgccctgagtgccgtgag
cgggtggccctcccagaggggggtgtgggcgccctccggaccaacttcttcatcaacggc
ctgctggacctggtccgccccacaggggaggcagagccaacctgcagcctctgtccgctc
attggccaggagaccagccagccggccgtctcccactgcctggactgcgccgacgacatg
tgccaggactgcgccagcgggcaccgctgctcccgcctcacccacctccaccgcgtggtg
gccatgaaggactacctctccggagagcacgacgaggagatccggaagcgccaggcgctg
cagtgcaaggagcacaccggcgaggagctgcgcttcttctgcacgccttgtgccgtcgtc
ctctgccgggagtgccggctgggggcccacctccagcacccttgcctgcccctggctgag
gcggcccaggcccgccggccggtcatcgtggagctcctggccggggtggaggagacggtg
caggtcatccggacggggagggccagcctggagagggaggctgcgcggctgcaggtgcgc
gaggctagcatccgggatgcggtggagcaggcgtgctcgcgggcggtgcagcggctgctg
gcgcagcaggaggaggtcctggcccagctggcggactacgtgaaggagcggcagaaggcc
tgccaggccctctgctccgatctggagttccaagagcaggtggcctccagcaccgtggcc
tttgcccagaaggtgctgagtctggggagggaggtggagattgtctccctggagcaggtc
atctgtgagcgtctcaggcatctgcagggcttctcctgggagccgctggccacccgcctg
ccctgcctggaggttgacgctgagatcgagggcagcggcccccgcctgttccacctggag
ttccgagaggagagccccactggagtgccagagagcccccaggaggcggctacaaaaggg
gcaaagaagaagacccatctgccagagggcccccaggaggaggccacaaaaggggcaaag
aaagagacccacctgccagagggcccccaggaggaggccacaaaaggggcaaagaaagag
acccacctgccctgcctggaggtcaacgctgagatccccactggagtgccggagggccac
aagaaggcggccacaaaaggggcaaagaagaagaggaggaagcaacagcagcaggtgccg
cctgtcaaggagggattccacatgaccaccctcatcctcaggggctgccagcaagccgta
gcccctgtgcctcctcccaaggtcccaggaaccccccttctgacacccaagcctctcttc
tcatgtagcttctgcgtcaagagccccagcgaccaaaagtgccccctggtcacagggctc
tgcccctttggctctggagagctgctggtggccgacaatcaaaacaagaatctgaagcgc
ttctccctgcagggggagttcaagggcactgtccccgtccccagtggcgtggccccggtc
agcgtggccactgtgggcagcaaggtggccttcacggctggctcctgcctctacctcctg
aatgctgagggtgagctggtgtggcagaaggccctggggcaggggcaagccagccacgcc
gtggcagcactggggggagaccgtgtggcggtgtgtgtggctgggcagttggaggtgtac
gacctggaggggcggctgctggagaagattgtgcccgagggcagtgcagagaggtgcctc
gtcttcctggccaaccacaaggacggctttgtgggctcggactggtaccaccgcagcgtg
gtcctgttcaccaggacggggcagctggtggccgagtgctctgaggagcagctgggcgag
tgccagccagggggcgtctgtgctgacgtcatgggcatcatttatgtggtcctgcgggag
ctgaacaaggtggtggccttctcccccagaggggagaagttgggggcgttccttgctgcc
aagaacagcatcaaccggccgcgggtggtcacagtggttgggaagcggcgctttgccgtg
gctctgagcaacggcaccgtccacatcttccggatcaggtatcagggcaagtga
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