Podarcis raffonei (Aeolian wall lizard): 128403116
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Entry
128403116 CDS
T09310
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
praf03016
]
128403116
Enzymes [BR:
praf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
128403116
Transfer RNA biogenesis [BR:
praf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128403116
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
128403116
NCBI-ProteinID:
XP_053223749
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Position
15:complement(15098140..15126178)
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AA seq
749 aa
AA seq
DB search
MGPLHFCFLPDMTMETWGSLYAHLAFLWLNRFYLYSGAVFGISLWLCIQFVSKTKKQNRN
QLRKSSLPQIATEGLAGEQKGPSTDKVHVTGVKIFFGSQTGTAKRFASILAESVASLNLP
AEVINMKDYDPDDCLGDETSSKNICVFLVATYTDGKPTENAVWFCKWLEEASSDFRVGKT
YLKGLRYAVFGLGNSLYADHYNTVGRSVDKWLWMLGARRVLSCALGDANVVKSKHGSLEA
DFEAWEAKFLARLQALCRGEKAACRGECKKGKCRSKRKAGQEMSLEQEQREEVAEEELFE
TTSEEDSGNEEGEGANQMVDVEDLGRVMGHMKKAQKVRPGFAIPLQRERELDQEVEKTGR
LQRRGEDALREMITPALRDALTKQGYRLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIE
SHRCLETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPPEMILQEAIENHQSLIKQFKGV
PGVRNDRFEEGMEPKHCALSLVGEPIMYPEINRFLKLLHRKNISSFLVTNAQFPEEIRSL
EPVTQLYVSVDAGTRDSLKKIDRPLFKDFWQRFLDSLQALAEKQQRTVYRLTLVKAWNVE
ELKAYSDLVSLGKPDFIEVKGVTYCGESSASNLTMANIPWHEEVGHFVQELVDLLPDYEI
ACEHEHSNCLLIAHKKFKISGEWHTWINYDRFQDLFRQYEQSGGAKTFTSADYVAPTPQW
AVFGAKERGFDPMDTRFQRKNKAKDISGC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggtccactgcatttttgctttcttccagatatgaccatggagacgtggggcagcctc
tatgctcacctggccttcttgtggctgaacagattctacttgtactctggagcggtgttt
gggatcagcctttggctctgcatccagtttgtcagtaagaccaaaaagcagaatagaaat
caactcagaaaatcaagccttccccaaattgctacagaagggcttgcaggagagcagaaa
ggccccagcactgacaaagtccatgtcactggggtgaagattttttttggttctcagact
ggaacagcaaagagatttgcgtcaatacttgctgagtctgttgcctcccttaacttgcct
gccgaagtcatcaacatgaaggactatgaccccgacgactgtctaggagacgagacaagc
agcaagaacatctgcgtcttcttagttgccacttacacagatgggaagccaacagagaat
gccgtgtggttctgcaagtggctagaagaagcatccagtgactttcgagtcggcaaaacg
tacctgaagggcttgagatatgctgtctttggcctggggaattctctctatgctgatcac
tacaacactgtgggcagaagcgtggacaaatggctgtggatgctaggggcccggcgggtc
ctctcctgcgccctgggggacgccaatgtggtgaagagcaagcatgggagcctggaggcc
gactttgaggcctgggaggccaagttcctggccaggctccaggccctctgcagaggggag
aaggcggcctgcagaggggagtgtaagaagggcaagtgccgctccaagaggaaggctggg
caggagatgtcgttggagcaggagcagagggaggaggtggcagaggaggagctttttgag
accacgagcgaagaggattctggcaatgaagagggagagggtgcgaaccagatggtggat
gtggaagacctgggcagagtcatgggccacatgaagaaagcccagaaagtgaggcctggt
tttgccatccctctgcagagagagcgtgagctggaccaagaggtcgagaagacggggcgg
ctccagcggagaggggaggatgccttgagagagatgatcacgccagctttgcgggatgcc
ctcacgaaacaaggctacaggttgatcgggagccactctggagtgaagctctgtcggtgg
acaaagtcgatgctccgtgggagaggcggctgttacaagcacaccttctatggcattgag
agccaccgctgcctggagaccacgcccagcttggcttgcgccaacaagtgtgtcttctgc
tggaggcaccacacaaaccctgtgggcacagagtggcggtggaaaatggaccctcctgaa
atgatcttgcaggaggccattgagaaccatcagagcctgatcaagcaattcaaaggcgtc
ccgggcgtgaggaacgaccgttttgaagaagggatggaacccaagcactgtgccctgtct
cttgttggggagccaatcatgtaccccgaaatcaaccgtttcctaaagctgctccatcgc
aagaacatttcaagcttcctagttacaaatgcacagttcccagaggaaatcaggagcctc
gaacctgtgacgcagctctacgtcagcgtcgacgcaggcaccagagacagcttgaagaag
atcgaccggcctctcttcaaggatttctggcagaggtttctggacagcttgcaagccttg
gcagaaaagcaacagcgcactgtctatcggctcacgctggtgaaagcctggaacgtggag
gaactgaaggcctactctgacttggtgtctcttgggaaaccggattttatcgaggttaaa
ggtgtgacctactgtggagaaagctcagccagcaacctcaccatggccaacatcccgtgg
cacgaggaggtggggcactttgtccaggagctggtcgaccttctgccggactacgaaatc
gcctgcgagcacgagcactccaactgcctcctgatcgcccacaagaagttcaagatcagc
ggggagtggcacacctggatcaactacgatcgctttcaggacctcttccgccagtacgag
cagagcgggggagccaagacgttcacctcggctgactatgttgccccgactcctcagtgg
gctgtctttggggcaaaggaaaggggctttgacccaatggacacccgattccaacggaag
aacaaagccaaagacatctcagggtgttga
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