Podarcis raffonei (Aeolian wall lizard): 128407883
Help
Entry
128407883 CDS
T09310
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128407883 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128407883 (DDX46)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128407883 (DDX46)
Spliceosome [BR:
praf03041
]
Complex A
U2 snRNP components
U2 related factors
128407883 (DDX46)
Complex B
128407883 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
128407883
NCBI-ProteinID:
XP_053232805
LinkDB
All DBs
Position
2:59137020..59175039
Genome browser
AA seq
1061 aa
AA seq
DB search
MGRESRSTKQQVSKQKQHYRKRSSSRGRSGSRSKSRSPSDKRAKRGDDRRSRSRERERRR
ERSRSRDKRRSRSRDRKRVSITQNLLVRRRSRSRERERSRERRRSRSRERRRSRSRSRGR
RSRSSSPGKNKKVENRSRSKEKVEGVEVNKEKKKEKEDKEEEKGQDVNNFDQNKLEEEMR
KRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEIE
DEELDPLDAYMEEVKEEVKKFNMRSVKGGGGGGSEKKSGPTVTKVVTVVKTKKASPETEK
KKGELMVNDQDAMEYSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYEPYRKNFYVEV
PELAKMTQEEVNAYRLEMEGIIVKGKGCPKPIKTWVQCGISMKILNSMKKHGYEKPTPIQ
AQAIPAIMGGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEGEGPIAVIMTPTRELAL
QITKECKKFSKTLGVRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTN
LRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPI
EVQVGGRSVVCSDVEQKVIVIEEENKFLKLLELLGHYQEQGAVIIFVDKQEHADGLLKDL
MRASYPCLSLHGGIDQYDRDSIINDFKSGVCKLLVATSVAARGLDVKHLMLVVNYSCPNH
YEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSSNPVPPELEKLWTDFKDQ
QKAEGKTIKKSSGFSGKGFKFDETEEALANERKKLQKAALGLQDSDDEDTAVSIDEQIES
MFNSKKRVKDMASSGGTSNVPAPTAGNAEKLEIAKRLALRINAQKNLGAEAQVLVSFQFK
DVMQQATNAILRGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFK
RYEEELEINDFPQTARWKVTSKEALHRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAI
ESANELAVQKAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcgagtccagatcaacaaagcaacaggtgtccaaacaaaaacagcattatcgg
aagcgctcctcatcacgagggcgttctggtagccgttctaagagtcgctctccatctgac
aaaagagccaaacgtggagatgatagacgttctagaagcagggaaagagaacgtaggcgt
gaaagatcacggagcagggacaagaggagatctcggtcacgtgatcgaaagcgtgtgagt
attacccaaaatctgcttgtgcgtaggcgttcacgaagcagagagcgggaacggagcaga
gaaaggagacgatcacgcagtcgagaaagaagaagatccagaagccgaagtagagggcgg
cggtcccgatcttctagccctggcaagaacaagaaagtggaaaacagatcacgatcaaaa
gaaaaggtagaaggtgtggaagttaacaaagaaaagaaaaaagagaaagaggacaaagaa
gaagaaaagggtcaagatgtaaataatttcgatcagaacaaactagaagaggaaatgagg
aagcgaaaagaaagagtagagaaatggagagaagaacagcgcaaaaaagctatggaaaat
ataggagaactaaagaaagaaattgaagaaatgaagcaggggaaaaaatggagcttagaa
gatgatgatgatgatgatgaagaaactgcagaaggggaaaaggaaggtaatgagattgaa
gatgaagaacttgatccattagatgcatatatggaagaagtgaaagaagaggttaagaag
ttcaatatgagaagtgtaaaaggtggaggtggaggtggaagtgaaaagaaatctgggcca
acagttactaaagtagtaacagtggtgaaaaccaaaaaagcatctccagaaacagaaaag
aagaaaggagaacttatggtgaatgaccaagatgcaatggagtattcttctgaagaggag
gaagtagatctccagactgcactgacagggtaccagaccaaacataggaaattgctggaa
ccagtggatcatgggaaaattgaatatgagccctacaggaaaaacttctatgttgaagtc
ccagagctggctaagatgactcaggaagaggtgaatgcatataggctggaaatggaagga
attatagtcaagggtaaaggatgtcctaagccaattaaaacctgggtacagtgtggtatt
tctatgaaaatcctgaattccatgaaaaagcatggctatgagaagcccacccctatccaa
gcccaggctatacctgcaattatgggtggacgcgatttgattggcattgctaaaacagga
agtggaaagactattgcttttctgttgcccatgttcaggcacatcatggatcagagacca
ctagaagaaggagagggtccaatagctgttattatgactcctactcgagagctggcttta
cagattacaaaggagtgtaagaagttctcaaagacacttggggttagagttgtatgtgta
tatggaggaacaggaataagtgaacagattgctgaactgaaaaggggtgctgaaataatc
gtttgcacacctggccgcatgattgacatgttagcagctaacaatggtcgagtgacaaat
cttcggagagtgacatatgttgtccttgatgaagctgatagaatgtttgatatgggcttt
gagcctcaggttatgcgcattgtagacaatgtgagacctgatcgccagactgttatgttc
tctgctaccttccctagagccatggaggctttagctcgtcgaatattaagcaagccaata
gaagtccaagttggtggtagaagtgtcgtctgctctgatgtggaacaaaaagtgattgtc
atagaggaggagaacaagtttttgaagttacttgaattattgggacattatcaggaacaa
ggagctgtcattatatttgtagataaacaagaacatgctgatggattgctgaaagactta
atgagagcctcttatccctgcctctctcttcatggaggtattgaccaatatgacagagat
agcataatcaatgattttaagagtggagtgtgcaagcttcttgtggccacatctgtggca
gcccgaggtcttgatgtaaaacatcttatgcttgtagtcaactacagctgccccaatcat
tatgaggattatgtgcacagagcaggcagaaccggacgagcaggcaacaaaggttatgca
tataccttcattactgaagatcaagcacggtatgctggtgatataattaaagctttggag
ttgtcaagtaatccagttcctcctgagctggagaagctttggactgacttcaaagatcag
cagaaggctgaggggaaaacaattaagaagagcagcgggttttctgggaaaggattcaag
tttgatgaaactgaggaggctttggctaatgagcggaagaaattacagaaagctgcactt
ggcttgcaagattcagatgatgaagatacggcagtttcaattgacgagcagattgaaagt
atgttcaattcaaagaaaagagtaaaggacatggcatcatctggcgggacatctaacgtt
cctgccccaacagcaggaaatgcagaaaagttagaaattgctaagagattggcattgaga
atcaatgcacagaagaatcttggagccgaggcacaagtattggtctcttttcaatttaag
gatgtgatgcagcaagctacaaatgctatcctgaggggtggcaccattcaggctccaacc
gtatctgcaaagaccattgcagaacaactggctgagaagatcaatgccaagctgaattac
gtgcccatagagaaacaagaggaggaaaaacaggaaggcggacaaaatgaatcttttaaa
agatatgaggaagaactggagatcaatgatttcccacagactgccaggtggaaagtaaca
tcaaaggaagccctgcacagaataagtgaatattctgaagctgccattacaatcagagga
acatactttcctccaggcaaagagcccaaggagggagaacgaaaaatttacttggccatt
gagagtgccaatgaattggctgtgcagaaagcaaaggcagaaatcaccaggcttatcaaa
gaagagcttatcagactgcaaaattcataccaaccaaccaacaaaggaagatacaaagtt
ttataa
DBGET
integrated database retrieval system
