Podarcis raffonei (Aeolian wall lizard): 128415162
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Entry
128415162 CDS
T09310
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128415162 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128415162 (USP47)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128415162 (USP47)
Peptidases and inhibitors [BR:
praf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128415162 (USP47)
Ubiquitin system [BR:
praf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128415162 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
128415162
NCBI-ProteinID:
XP_053247009
LinkDB
All DBs
Position
1:complement(67439623..67487733)
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AA seq
1376 aa
AA seq
DB search
MVPSEENQLVPKEDMLWRCRQSIFDEMKKKFSQIESAADEPRVLCIIQDTTNSKTVNERI
TLNLPASTPVKRLFEDVATKVGYINGTFDLIWGNGGSVADTTPLDQSSDKSVVDAGFEPG
KKNFLHLTDKDGEQPQIVLDEASGADDRNPDRFIGPLPREGSAGCSNDYVGQNYSYTSIL
SKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYRWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMGSF
IDTEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAAS
EKNSLLYELFSVMVHSGSAAGGHYYACIKSFTDDQWYSFNDQHVSKITHEDIKKTYGGTS
GSRGYYSSAFASSTNAYMLIYRLKDTTRNAKFLEVTEYPEHIKRLVEKEKELEEQEKRQR
EIERNTCKIKLFCLHPVKQIMMENKLEVHKDKTLKEAVEIAYKIMDLEEAVPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGILLGGVKSTYMFDLLLETRRPDQAFQCYKPGEVMVKVHV
VDLKQETVVPPISVRAYLNQTVTEFKHLISKTVHLPAETMRVVLERCYNDLRLLGVANKT
LKAEGFFRSNKVFIESSESQDRQLAFTDSQLWKLLDRHANTIRLYVSLPEQSPGSQFRRT
VLQKASGDSGNLDEICERVKGPLGNMKSVEAILEESTEKLKTLSLQQQQQEGDNGDSSKS
TEASDFENIESPSNEVDSSVSAENRELENQIQVSDPDNFQSEERSDSDVNNDRSTSSVDS
DILSSSHSSDTLCNVDSAAIPLANGLDSHSITSSRRSKANEGKKETWDTAEEDSGTDSEY
DESGKSRGEAQYMYFKAEPYIAEEGSGEGQKWLLIHVDKRITLSAFKQHLEPFVGVPSSQ
FKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPCK
FLLDSVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHVYEED
INISSNWEVFLEILDGAEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESSSVDELKEKL
SEISGILLENIEFAKGRGTFPCEISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRD
KTEEVVELTEEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaggagaaccagctggtccccaaagaggatatgctttggagatgcaga
caaagtatctttgatgaaatgaagaagaaattttcgcagatcgaaagtgccgctgatgaa
cctagagtgctttgtataatccaagatacaactaattctaagaccgttaatgagcgcatc
actttgaacttgccagcttccactccagtaaaaagactgtttgaggatgtggccactaaa
gtgggctatattaatggaacatttgatttaatatggggaaatggaggcagcgttgctgat
acgacaccattggatcaatcaagtgataaatctgttgttgatgctggttttgaacctggg
aaaaagaactttctgcatctgacagataaagatggagaacaacctcagatagtattggat
gaggccagtggagcagatgaccgtaatccagataggtttataggccctcttccacgagaa
ggttcagctggttgttcaaatgattatgttggtcagaactattcttatacatcaattctg
agtaaatcagaaacgggctatgtaggtttagtaaatcaagcaatgacttgctatttgaac
agccttctgcaaacccttttcatgactcctgaatttagaaatgcattatatagatgggaa
tttgaagaatcggaagaagatccagtgaccagcatcccttaccagcttcaaaggctattt
gttttattacagaccagcaaaaagagagcaattgaaacaacagatgttacacgaagcttt
ggatgggatagtagtgaggcctggcagcagcatgatgtccaggaactctgtagagtcatg
tttgatgctttggaacaaaaatggaaacaaacagaacaggctgatctcataaatcagctc
tatcaaggcaagctgaaggactatgtaagatgtctggaatgcggctatgagagttggagg
attgatacatacctggatattccgttggtcattcggccctatggctccaaccaggctttt
gcaagcgtggaggaagctttacatgctttcattcagcctgagatccttgatggccccaat
cagtacttctgtgaacggtgcaagaagaaatgcgatgcaaggaagggcttgcgatttttg
cattttccctatctgctgaccttgcagctaaagagatttgactttgattacaccactatg
cacaggataaaacttaatgaccgtatgacatttccagaagagctagacatgggttcattt
atcgacactgaagatgagaagtctcctcaaacagaaagctgcactgacagtggcgcagag
aatgaagggagttgtcatagtgatcagatgagcaatgatttttcaaatgatgatggggtt
gatgaaggaatatgtctggaaagcaatagtgctgctgaaaggatttcaaaagctgccagt
gaaaagaattcattattatatgaactgttttctgtcatggtccattcgggaagtgcagct
ggaggccattactatgcatgcataaaatcattcactgatgatcaatggtacagcttcaat
gatcaacatgttagcaagataactcatgaagacattaagaaaacttatggcggaacatct
ggaagcagaggatattattccagtgcttttgcaagctctacaaatgcatacatgcttata
tatagactgaaggatacaacgaggaatgcaaagttcctagaagtgactgaatatccagag
cacattaaaagactcgtagaaaaagaaaaggagttggaagaacaagaaaagagacaacgt
gaaatagagcgcaatacttgcaagataaaattgttctgtttgcatcctgtgaaacaaata
atgatggagaataaactagaagttcacaaggacaagactctgaaggaagctgtcgagata
gcctataagataatggatttagaagaagcggttcccctggattgctgtcgtcttgttaaa
tatgatgagttccacgactatttggagcgatcatatgaaggagaagaggacactccaatg
ggaatcttgcttggaggtgttaaatcaacatacatgtttgatctactcctggaaacaagg
cgacctgaccaagctttccagtgttacaaacctggtgaagtcatggtaaaagttcatgtt
gttgacctaaagcaagaaactgtggttcctccaattagtgtccgtgcttatttgaaccag
acagttacggaatttaagcatctcatttcaaagactgtacatttgccagctgaaacaatg
cgggttgtgctggaacgttgctacaatgatttgcgtctcctcggtgtggctaacaaaaca
cttaaagctgaaggcttttttaggagcaataaagtgtttattgaaagttcagagtctcag
gatcgacaactggcatttacagattcacagttatggaaactcctagatcggcatgcaaat
acaatcagactgtacgtttcattaccagaacaatctcctggatcacagttcaggcggaca
gttttacagaaagccagtggagactctggaaatctagatgaaatatgtgaaagagtgaaa
ggacctctaggtaatatgaaatcagtagaagctatcctagaagaaagcactgaaaaactt
aaaaccttatctctacagcaacagcagcaagaaggggataatggagacagtagcaagagc
acagaggcaagtgactttgaaaacattgaatctccttcaaatgaggtagactcatcagta
tcagcagaaaaccgagaacttgaaaaccaaatacaggtttctgatccagataatttccag
tcagaggagcgatcagattctgatgtgaataatgacaggagtacaagttcggtggacagt
gatattcttagttccagtcacagtagtgacacattgtgcaatgtagacagcgctgctata
cccttggccaatggacttgactcacacagtataacaagcagccggagatcgaaagccaac
gaagggaagaaagaaacatgggatacagctgaagaggattctggaactgacagtgaatat
gatgaaagtgggaagagcaggggagaagcacaatatatgtatttcaaagcagagccctac
attgcagaagaaggttcgggagaggggcaaaaatggctattgattcatgttgataaaaga
attacgctctctgccttcaaacaacacttggagccttttgttggcgttccatcctctcag
tttaaggtctttcgagtttatgccagcaatcaggagtttgagagtgttcggctgaatgag
accctttcatccttctcagatgacaacaagataacaattcggcttgggagagcattgaag
aaaggtgaatacagagtcaaggtttatcagctcttggtaaatgatccagagccctgcaag
tttcttctagattctgtttttgctaaaggaatgactgtgcggcagtcaaaagaggagcta
cttcctcagctcagggaacagtgtggactagatctgactattgacagatttcgcctgaga
aagaagacctggaaaaatccaggaactgtgtttctggattatcatgtttatgaagaagac
attaatatttcaagtaactgggaggttttcctagaaatacttgatggagcagaaaaaatg
aaatctatgtcacagcttgctgttctgtcaagaaggtggaggccatcagagatgaagctg
gatccatttcaggaagtagttttggagagcagcagtgttgatgaattaaaagaaaagctt
agtgaaataagtggaatccttttagaaaacattgagtttgcaaagggcagaggaacattt
ccatgtgagatctcaattttagaaatacatcaggatttggattggaatcctaaggtttca
acactgaatgtatggcctctctacatctgtgatgatggagcagtgattttttatagggat
aaaactgaagaagtggtggaactgacggaagagcagagaaatgagttaatgaaaaaagaa
agcagcagacttcagaaaactggacaccgtgtgacctactccccccgtaaagaaaaagca
ttaaaaatatatctggatggagcaccaaataaagatttgactcaagactga
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