Podarcis raffonei (Aeolian wall lizard): 128417478
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Entry
128417478 CDS
T09310
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128417478 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
praf01009
]
128417478 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128417478 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128417478 (RB1CC1)
Protein phosphatases and associated proteins [BR:
praf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128417478 (RB1CC1)
Membrane trafficking [BR:
praf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128417478 (RB1CC1)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128417478 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
128417478
NCBI-ProteinID:
XP_053252141
LinkDB
All DBs
Position
7:39426493..39466428
Genome browser
AA seq
1594 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKQAIQTKYKIAIQHQVLVVNGGECMAADRKVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEIAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENAYSSYLQ
SIDDIKLKLTHLGAAVSIMAKIPLLESLTRHSYRECLERLDSSAERGGTESEDTENEKSA
EVAFSPDMLKMNKQSLLASFCKSVEHAIPDGTPSEKVDENSQASQNPSVQDSDASVELKE
TDLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLADCRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKIVEKLSNVPQMYCLAVVEVVRRKMFVKHYREWAAALIKDGKHLYDAEKAKRESF
GKLFRKSFLRNRLFRGLDAWPPSFCTRKPRRFDGELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSVTTPRMES
TTIATSPRTPPPLSLHGPLCPPVCPPGPLEELSPDSIDAHTFDFETIAHPSIEQALKQGS
LDLDSLAESPESDFMSAVNEFIIEENLTSPNVISDPQSPEMMVESLYSSVINAIDSRRMQ
DTNICAKAEALENSAINVYMEKCRDVAEESRLNLINIKEDLCHFRTFVEKEQCDLSSSLK
CTSIEIKNIIEKVKFSLEKTLKDKHQKELQLVKTEYESKMNTLVEDGEENKKKITKLKGD
LKGLEDVLHDKDNEFAIVKNEKEAVVFLQNEKEQKLLELESQMKNQSCEIKELRESRERV
LESLKKLHTENDEKMQLLKAELQTLEQDHLKELESNLQERHTQEFDELMAKHNDCLEELK
KENKLRLEQMQETHAANVHEKEQQIEELKVKVSELSDLRCKLEVELALKEAETDEMKILL
EENKTQQQDNLKSLIDKETETLRKQIDNLNHVIQINNDEYQVGLAELRTLMTIEKDQCIA
ELIDRHEEETNLLRTELSKVTSLHQQALEAEKRLEEQITELQGKLELEVSALEKQKEENL
VLCEQQKKYEATISKFAEEKELLLTNHEQDRKLLVQKLNCEKEDAVRNALKEFELQREAV
EKELLGKIQQLEMQVNQSSVESSASSLVAELQEKLQEEKVKFLEQLEEHEKRKNEEMQNI
RTSLTAEQQTTFNTVLTREKMKKENIINDLSDKLKAIIQQQERDKDLIESLSEDRACLLE
EKKKLEEEVNKLRSSNFVPPACLPPPSEPPGACAADFTAETERLTSDTTEEGKMDSTLET
SMMAVNENVQILSEEKQRIMMLEKTLQLKEEENKRLNQRLMSQSMSSVSLRHSEKIAIRD
FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLGKVM
EKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtcaacactggaaccacccttacctttgacacagaactt
gccgtacagaatgtggcagaccttaaacaagctatccaaactaaatacaagatcgctatt
caacatcaagtattggttgtcaatggaggagagtgtatggcagctgacaggaaagtctgt
agttatagtgctggaacggatacaaacccaatttttctcttcaacaaagaaatgatcttg
tgtgaacgtcctccagctattccaaaaacaacattttcagcagaaaatgagatggaatta
aaagtggaagaatctcttatgatgcctgcagtttttcacacggtagcttcacggacacag
cttgctgtggaaatgtatgagattgccaagaaactttgttccttctgtgaaggcctagtc
catgacgaacatcttcagcaccaaggctgggctgccataatggcaaatttggaagattgc
acatattcttaccaaaagctgcttttcaagtttgaaaatgcatattcaagttacctgcag
tccatagatgatattaagctgaaacttacacacttaggggctgctgtttcgataatggcc
aagatcccactcttggaaagcttaaccagacacagttaccgggaatgtttagaacgacta
gattcttctgctgaacgtggtgggacagaaagtgaagacactgagaatgagaagtcagct
gaagtggcattttctcctgacatgcttaaaatgaacaaacaatcgctgttagcatcattt
tgcaaatcggtagagcacgcaatcccagatggcacaccctccgaaaaagtggatgaaaac
agccaagccagtcaaaatccttctgttcaggacagtgatgcttcagtggaacttaaggag
actgatctgccttctttcaatgtctcacttttagactggataaatgttcaagatagacct
aatgatgttgaatccttggtcagaaaatgttttgattccatgagcagactcgatccaagg
attattcagccctttttggcagactgtcgacaaacaattgccaaattagataatcagaac
atgaaagccattaagggacttgaggacaggctttatgcattggaccagatgatagctagc
tgtagcagactggtaaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagcagagaacttgaaagatccttctgtattacctgatttgtgcttgagtcatgcaaat
caattgatgattatgttaactaaccaccggaaacttttagatattaaacagaaatgtact
actgccaaacaagaacttgcaaataatctacaagtccggctgaagtggtgctgctttgta
atgcttcatgctgaccaggatggagagaaacttcaagcattgcttcgtcttgtaacagag
ctgctagaaagagtgaagattgtagagaagcttagtaatgtccctcagatgtactgcttg
gctgttgttgaagttgtaaggagaaagatgtttgtaaaacactacagggagtgggctgct
gctttaataaaagatgggaaacatctttatgatgcagaaaaggccaaaagggaatctttt
ggaaagttatttaggaaatcttttctaagaaatcgtttgttcaggggacttgatgcctgg
cccccatccttttgtacccgaaaacctcgcaggtttgatggtgaacttcctgatatctca
ttatccgatctgcaatttttgcagtccttttgtccttcagaagtccaaccattactcagg
gttcctatactttgtgatttcgaacctctccaccagcatgtacttgctctacataatctg
gtcaaagcagcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaa
caaaaggcttccaacagtcaagcctcaccacagtctgtcactacaccaaggatggaaagt
acaacaattgctacctctcctagaactcctccaccactcagtcttcatggtcctttgtgc
cctcctgtgtgccccccaggtcctttagaagaattgtctccagacagtattgatgctcat
acatttgattttgaaacgattgcccatccaagcattgaacaagcccttaagcaagggtca
ttagacttggactcactggcagaaagtccagaatctgattttatgtcagcggttaatgag
ttcataatagaagaaaacctaacgtcacccaatgtgataagtgatcctcaaagtccagaa
atgatggtggagtctctctattcctcagttatcaatgcaattgacagcaggcggatgcaa
gatacaaatatatgtgcaaaagcggaagctttagaaaattctgctataaatgtttatatg
gaaaaatgtagagatgttgccgaggaatctcggttaaatttaataaacataaaagaagac
ctttgtcattttagaacatttgtagaaaaagaacaatgtgacctttccagttctttaaaa
tgtacttcaatagaaataaagaatattatagaaaaagtaaaattttctcttgaaaaaacg
ctaaaagataaacaccagaaagagctgcaattggtaaaaactgaatatgaaagcaaaatg
aatactttagttgaagatggtgaagagaacaaaaaaaagatcacaaaattaaaaggtgac
ttaaaaggtcttgaagatgttttgcatgataaagataatgaatttgcaatagtaaagaat
gaaaaggaagcagttgtgtttttacaaaatgaaaaggagcaaaaattgcttgaattggaa
agtcaaatgaagaatcagagttgtgaaattaaagaactaagagagtcacgtgaaagggtg
ttggagagtttgaaaaaacttcatactgaaaacgatgaaaaaatgcagcttctgaaagca
gaacttcagactttggagcaagatcacttaaaggaactggaatccaatctacaggaaaga
catacacaagaatttgatgaactaatggctaaacacaatgattgcttggaggagttgaaa
aaggagaataaactccgacttgaacaaatgcaagaaactcatgctgcaaatgtccatgag
aaagaacaacagattgaggaattaaaggtcaaggtttctgaactgtctgacttaagatgc
aaattagaggttgaacttgcactgaaagaggcagaaacagatgaaatgaaaatactttta
gaagaaaacaaaactcaacagcaagataatctaaaaagtcttattgacaaggaaactgaa
acgttaagaaaacagattgataatttgaaccatgtaatacaaattaataatgatgaatat
caggtgggtctagcagagctaagaactttaatgacaattgagaaagatcagtgcattgca
gaattaattgataggcatgaagaagaaacaaatttgcttagaactgaattaagtaaagta
acttctttgcaccaacaagctcttgaagcagaaaaaagattggaagaacaaataacagag
ttgcaaggtaagctagaattggaagtcagtgccctagaaaagcaaaaagaagaaaatttg
gtattgtgtgaacagcaaaagaaatatgaagccactatcagtaagtttgcagaagaaaaa
gagctactattaactaaccatgaacaggacaggaaactgcttgttcaaaagctcaactgt
gaaaaagaagatgcagtccgaaatgcccttaaagaatttgaattgcaaagggaagctgtt
gaaaaagaacttttggggaaaatccagcaactagagatgcaagttaatcagagttcggtt
gaatcatctgcatcaagcttagttgcagaacttcaagaaaaacttcaggaagaaaaagtg
aagtttttggagcagcttgaagaacatgagaaaagaaaaaatgaggaaatgcaaaacatt
cgaacatcactcaccgcagaacagcagacgacgtttaacactgttctaacaagagaaaaa
atgaaaaaggaaaacataataaatgatcttagtgacaaattaaaagcaataatacagcag
caagaaagggataaggatctgattgaaagtctttctgaagaccgagcctgtttactcgaa
gagaagaagaaacttgaagaagaggttaataagctgagaagtagcaattttgttccacca
gcctgtttacctcctccttcagaacctcccggagcttgtgcagctgattttacagcagaa
actgagcgattaacgtcagataccacagaagaaggaaaaatggattccacgctggaaaca
agcatgatggctgtaaatgaaaatgtgcagattttgtcagaggaaaagcagaggataatg
atgttagaaaaaacgttgcagttgaaagaggaggaaaataagaggcttaatcaaagattg
atgtctcaaagcatgtcttcagtgtctctaagacattctgagaaaattgcaatcagagat
tttcaggttggcgatttggttctcattattttggatgaacgtcatgacaactatgtatta
tttactgttagcccaactttgtatttcttacactcggaatctcttgctgcactggatctc
aaaccaggtgagtgtgcttcaggagcatctcgaagaccctgggtgttgggaaaagtgatg
gaaaaggaatattgtcaggcaaaaaaggcacaaaacagatttaaagttcctttgggtaca
aaattctacagagtaaaagcagtgccatggaacaagaaagtataa
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integrated database retrieval system
