Limnobaculum zhutongyuii: EKN56_00105
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Entry
EKN56_00105 CDS
T06157
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKN56_00105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_2
DUF4625
Big_3_5
Y_Y_Y
FG-GAP_3
Big_3_3
Cadherin_5
Glucodextran_B
FG-GAP
JHBP
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
QBH94953
UniProt:
A0A411WFH8
LinkDB
All DBs
Position
80555..86164
Genome browser
AA seq
1869 aa
AA seq
DB search
MELYAFTRGDTTDDSTPTFTGKAEANGTVTIYNGNTLVGKTEVNSGGDWTFTPSTALADG
DYEFIIKVTDKAGNTGAATDQFNLTIDTTKVTVKIVKLLDDVGDITGPITPTTGVTDDTR
PEVVGEGKTGSVIKVYDGENLLGSTTVKADGSWSFTPSSDLGQGSHSITATATDKAGNTS
PKTTPFVFEIDTVKPSVPTIDSAIDDVGDIQGTLNNNSWTDDPTPTLVGKAEKGSIVKVY
DGEAFLGSVTANSSTGEWSFTPVSGLPEGEHKFHVTATDKAGNTSDKSADFTLTMDYTPP
PFDALSITGVDDRVGALTGNVISGGETDDTRPTISGTGTAGDTITVYTKDSSGNHTIGTA
KVIADGTWSLKPASPLLPGKNEFTAEESDPVGNKVGPCKEYIVTLNVAPPAPPVIERVED
NVGNPNDAVVALQKDEVTNDNTPTIIGTAVANGIVTIFSNDVAIGTAKVSADNKWSFTPS
PALIDGKYEIRASVTDTIGRASEKTGPFGFTVDTTAPGKATDLVVIDNEGDWTGILTSGD
ITDDSTPTFTGKAEANSTVTIYNGNTVVGKADVNGSGDWTFTPSTALIDGDYKFTITVTD
KAGNTGAATDQFDLTIDTSKVTVKIVKLLDDIGDITGPITPGTGVTDDTRPEIIGEGKTG
SIIKVYDGENLLGSTTVKADGSWTFTPTVDMGQGTHSITATATDLAGNTSPKTSPFIFEI
DTLKPSMPTIDSAVDDVGDIQGPLANNGWTDDPTPTLIGKAEKGSTVKVYDGDALLGTVV
ANSTTGAWSFTPASGLPEGEHKFHVTATDKAGNVSSPSTDFILTLDFTPPPFDMLAITGV
DDRVGIITGNVKSGGITDDSRPTISGTGTAGDTITVYTTDSTNNHVIGTAKVDDNGQWSL
RPAVALIQGENKFTAVETDPVGNSTEPCAPYTITLDTFISDAKVTITAITEDRGSSSTDF
ITNDNTLLISGTLDKALKSDETVEITLDSGKTWTKATTLTDSAWTVDLQTKVLADGDYTI
NARVVDTAGNVGSTDSHALSIISESRDMNGLGTTTKVTTDTCHGLVSGDLFSHSATLTNT
DMVTRDRNVTVTGTLSAALLAGEKLQISLDDGTTWKTLTMAGNNWSYVLPEVSADTTYNF
KLQVIDNAGNLGRNTTFAESYKVVIDLTVPDMITAAPDIAKHVSTKDAFTFDSSHYGTVE
AGTIVALVSDENRNGSYQEGLDQVLGFAKANADGTWSMTTKLPAGAHNLAFMVWDEAGNH
SSMGAATSVGVTDGEGSLLITQKWGGTTDSDGRGLNSAAVTISQDGLWSFFQSVRGTSGT
TTANAGRVYTATDQENYTSTYLAQPTTANGAGYDVDNNSYSRYVNSAVFADINRDGYTDV
MSQVSSYLNNGRTAYWLQNADGTFSPKAVNQGSDNHLGGVIAYDREGDGYLDFVLADSEA
DSISFLKNDKGVLSYESVSGFTNGHPGGALPTGLSIMHEVGAVDIDNNGTVDITAHIDYN
GAGNFVGNTSRGLGILYNQLTNNGSGKTNFGSVGYYANVFTNDGHEDYGNLSISMTYADF
NGDGWLDLFLSRGSKAGANSDESRIYLNDGTGRLIAQDSQALWFGDNLAGGTSLAVDWNH
DGKMDIIEIPRSGVNGSPTLYTNLGTDVWNGGGVSLTGSTKFDNITGAVALDYDWDGSMD
IVLYRSGSDADVVSSTSSAPTLLVKNTNIAADGTSLQIRIVDGFGINTYYSNTVKLYDSK
GACVATQLINPQASGSSNSMGLVSFFGLDPNEVYSVQLLRITNGVTDHVGAVPLIGGLAN
NTVNVNWGGLTTSKSHDAYVLTAESSDATNNTVGTAGIIGTGYNDTFFGSGGDDTYTGGG
GWNLIVSGQ
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
gtggagctttacgccttcacccgtggtgataccacggatgacagcacaccaacctttacc
ggtaaggcagaggccaacggtaccgtcaccatctataacggtaatacccttgtgggcaaa
accgaggtcaacagcggtggtgactggacatttaccccaagtaccgcactggccgatggc
gattatgaatttatcatcaaagtgactgacaaagcgggtaacacgggtgcagcgacagat
cagtttaatctgaccattgatactactaaagtaacagtgaaaatagtcaaactgctggat
gatgtgggtgatattaccggcccgattactccaaccactggggttactgacgatacgcgt
ccggaagtggtcggtgagggtaaaactggcagcgtcatcaaagtgtatgacggtgaaaat
ctgctgggttctaccacggtgaaagccgatggcagttggagttttacaccatcctcagat
ctgggtcagggtagccatagtattaccgccacggcgacggataaggcaggtaataccagc
cctaagacgacgccatttgtgtttgaaatcgatacggtgaagccatccgtaccaaccatt
gattcagcgattgatgacgtgggtgatattcagggcacgttgaataacaacagctggact
gacgatccaacaccaacgctggtgggtaaagccgagaaaggcagtatcgtgaaggtgtat
gacggtgaagccttcctgggctcggtgactgcaaacagcagcaccggcgaatggagtttt
acgccggtttcagggttaccggaaggggaacacaagttccacgtgacggcaacggataaa
gcgggtaacaccagtgataaatcggccgattttaccctgactatggactataccccaccg
ccatttgatgctttatcgatcactggtgtggacgatcgggtaggcgcattaaccggtaat
gttatctccggcggcgaaactgatgatacccgtccaaccatcagcggtaccggtactgct
ggtgacactattaccgtctacaccaaggacagctccgggaatcacactattggtaccgcc
aaagttattgctgacggaacctggagcttgaaaccagcctctccattactaccgggtaaa
aacgagttcacggcagaagaaagcgatccggtgggtaacaaagttggcccatgtaaagaa
tacatcgttacgttaaacgtggctccgccagcaccaccggtaattgaacgggtggaagat
aacgtcggtaacccgaatgatgccgtagtcgccctgcaaaaagacgaggtgaccaatgac
aacacgccaaccattattggtaccgcagtagccaacggcatcgttactattttcagtaac
gatgtggcaattggcacggcaaaagtgagcgcagataacaagtggagctttaccccatca
cctgcgttaatcgacggtaagtatgagatccgcgccagcgttaccgacactatcggcaga
gccagtgaaaaaaccggtccgtttggctttactgtcgataccactgcaccaggtaaggcc
accgatttggtggttatcgataatgaaggcgactggactggcattctgaccagcggtgat
atcaccgatgacagcacgccaacctttaccggcaaggcggaagcgaatagtaccgtgaca
atctacaacggtaataccgtggtgggtaaggccgatgtaaatggcagcggtgactggaca
tttaccccaagtaccgcactgattgatggtgattataaatttaccattacggtgaccgat
aaagcgggtaacacgggtgcagcgacagaccagtttgatctgaccattgatacctccaaa
gtaacggtgaaaattgtcaaactgctggatgatataggtgatattaccggccctatcacc
ccgggaaccggcgtgactgatgatacccgtccggaaatcattggcgagggtaaaactggc
agcatcataaaagtgtatgacggtgaaaatctgctgggttccacaacagtgaaagctgat
ggaagctggacttttacacctacagtagatatgggccagggtacccacagcatcaccgct
acagctaccgatctggcggggaataccagccctaagacttcaccattcattttcgagatt
gatacgctgaaaccgtcgatgccaaccattgattcagcggttgatgatgtgggtgatatt
cagggcccactagccaataacggctggaccgatgacccaactccaaccttgattggtaaa
gccgagaaaggtagcacggtgaaagtgtatgacggcgatgctctgctgggtaccgttgtg
gcaaacagtactactggtgcatggagctttactccggcctcaggtttaccggaaggggaa
cacaagttccacgtgacggcaacggataaagcaggcaacgtcagctctccatcaacagac
ttcattttgactttggacttcacacctccaccatttgatatgttggcgatcactggtgta
gacgatcgggtcggtattattacggggaacgtcaaatcaggtggaattaccgacgatagt
cgcccaaccatcagtggtaccggtactgctggtgacactattactgtgtacaccactgac
agcaccaataatcatgtgattggtactgcgaaagtggatgacaacggtcaatggagcctg
cgaccagcagtggcattgattcagggcgaaaacaagttcaccgcagtagaaaccgatccg
gtgggcaattcaactgaaccttgtgcaccgtacactattaccttagacacctttatatca
gacgcaaaagttactattactgcgatcactgaagaccgtggtagctcaagcactgacttt
atcaccaatgataatacgttgttgattagcggtacgctggataaagcactgaaatctgat
gagacagtagaaattacgctggatagcggcaaaacctggactaaggcaacaacgctgacc
gatagcgcctggaccgttgatctacagactaaagtgctggctgatggggattacaccatc
aacgcccgcgtggtggatactgccggtaacgttggtagcaccgactctcatgcgttgagt
attatcagcgaaagtcgtgatatgaatggtttgggcaccacgacaaaggttaccactgat
acctgtcatggtctggtatccggtgacctgttcagccacagtgcaacactcactaacact
gatatggttacccgtgaccgtaacgtgacggttaccggtactctgagtgctgcattgctg
gccggtgaaaaactacagatctcgctggatgacggcacgacctggaagacgctcacgatg
gcaggtaataactggagttatgtgttacctgaagtttctgcggacaccacatataacttt
aaacttcaggtgattgataatgccggtaatctgggcagaaatactacgttcgccgagagc
tacaaagtcgtcatcgatctgacggtaccggacatgattactgccgctccggatatcgct
aagcacgtcagcaccaaagatgcctttacttttgacagcagccattacggcacggtggaa
gccggaactattgttgcactggttagcgatgagaaccgtaacggtagttatcaggagggt
ttggatcaggtgctgggctttgctaaagcaaatgcagatggcacctggagcatgaccaca
aaactgcctgccggggctcataacctggcgtttatggtatgggacgaagcgggtaaccac
tcaagtatgggggccgccaccagcgtcggggtgactgacggtgaaggcagcttgctgatt
actcaaaagtggggcggaacaacggattcggacggtcgtggccttaactcggcagcagtc
acaatcagtcaggacggtttgtggtcgttcttccagagcgtacgtggtacctccggtaca
acgaccgcgaacgccggtcgtgtgtataccgcaaccgatcaggagaactacacctctacc
tatctggctcagcctaccactgcaaacggtgcgggttatgatgtcgataataactcctac
agtcgctatgttaactcagcggtatttgcggatattaaccgcgatggttacaccgatgtg
atgtcacaggttagttcatacctgaataatggtcgtaccgcctactggttacagaatgca
gacggtaccttctcgccaaaagcggtgaatcaggggtcggataaccatctgggtggtgtg
attgcctatgaccgtgaaggtgacggttatctggacttcgtgttggcagattctgaagct
gactctatttcattcctgaagaatgataaaggcgtactgtcttacgaaagtgtatccggc
ttcactaatggtcatccgggaggtgctctcccaactggtctgagtattatgcatgaagtg
ggtgcggtggatatcgataacaacggtactgtcgatattactgcgcacattgactacaac
ggtgcaggtaatttcgttggtaatacgtcccgtggtttaggcatcctgtataaccaactg
accaataatggttcaggaaaaactaacttcggctctgttggttactatgccaacgtattt
accaatgatggccatgaagactatggcaatctgtccatctcgatgacctatgcggacttt
aatggtgacggctggctggatctgttcctgagtcgtggttctaaagccggtgcgaacagc
gatgaaagccgtatctacctgaacgatggtaccggtagattgattgctcaggacagtcag
gcactgtggtttggtgacaatctggctggtggtacctcgctggcagtggactggaaccat
gacggtaaaatggacattatcgaaattccacgatccggtgtgaacggtagcccaacgttg
tataccaatctgggtactgatgtctggaatggcggtggggtcagcctgacgggctcgact
aagttcgataatattaccggagctgtagcgctggattacgactgggatggctcgatggac
atcgtgctataccgttccggcagtgatgctgacgtggtgtccagtactagctctgcccca
acgctgttggtgaaaaacaccaatattgcggcggacggtaccagcctgcagatccgtatt
gttgacggtttcggcatcaatacctactacagtaataccgttaagttgtatgactctaaa
ggtgcctgtgttgctacacagttgattaacccgcaggcatccggctccagtaatagtatg
ggtctggtcagcttcttcggattagatcctaatgaagtgtactcggtgcaattgctgcgt
atcaccaacggtgtgactgaccatgtgggagcagttccacttatcggtggccttgccaac
aacacggttaacgtgaactggggcggtctgacaaccagtaagtcgcacgatgcttacgta
ctgacggcagaaagttctgacgctaccaacaatacagtaggaacggccggtattatcggt
accggttataacgatactttcttcggctctggtggggatgatacctacaccggcggtggc
ggctggaacctgatcgtcagcggtcagtaa
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