Limnobaculum zhutongyuii: EKN56_11480
Help
Entry
EKN56_11480 CDS
T06157
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag01501
beta-Lactam resistance
prag01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EKN56_11480
01503 Cationic antimicrobial peptide (CAMP) resistance
EKN56_11480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prag02000
]
EKN56_11480
01504 Antimicrobial resistance genes [BR:
prag01504
]
EKN56_11480
Transporters [BR:
prag02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EKN56_11480
Antimicrobial resistance genes [BR:
prag01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EKN56_11480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QBH96963
UniProt:
A0A411WL52
LinkDB
All DBs
Position
2564395..2567544
Genome browser
AA seq
1049 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIIIMLAGALALVQLPVSQYPTIAPPAVSISASYPGADAQTVQDS
VTQVIEQNMNGIDNLMYMSSTSDSAGNASITLTFDSKADPDIAQVQVQNKLQLATPLLPQ
EVQQMGISVKKATSSFLMVAGFISEDGSMSQEDIADYVGSNVKDPLSRTNGVGDIQLFGS
QYAMRVWLDPNKLNNYSLTPLDVNNAIKVQNNQIAAGQLGGTPPVKGQQLNSSIIVQTRL
QTPEQFGQILLKINTDGSQVRLKDVATIELGGESYNVVARFDGKPASGLGIKLATGANAL
DTAAAVKAELTALERYFPAGLKIVYPYDTTPFVKISINEVIKTLVEAILLVFIVMYLFLQ
NLRATLIPTMAVPVVLLGTFAVLSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIM
VEEGLPPKEATRKSMGQIQGALVGIALVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMVL
SVLVAMILTPALCATILKPVAKGSHGATTGFFGWFNNMFEKNTHHYTNSVANILGSTGRY
ILIYLVLVVGMALLFIRLPSSFLPEEDQGVFLAAVQLPQGATQERTQKILDEVSDYFITK
EKDNVVSVFTVGGFGFSGQGQNTGLAFIKLKEWDERPGADNKVSAIVGRASKAFSQIKDG
MVFAFNLPAIVELGTASGFDFQLIDQAGLGHEKLTEARNQLLGMIAKHPDMLVGVRPNGL
EDTPQFKLTIDQEKAQALGVSISDINQTLSTALGGSYVNDFIDRGRVKKVYVQADAPFRM
VPKDIDNWFVRGTNGQMVPLSAFSSAHWQYGSPRLERYNGLPSMEILGEAAPGKSSGDAM
KLMEDLASQLPIGIGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGVIGALVATTVRGMENDVYFIVSLLTTVGLSAKNAILIVEFAKDLMDKEGKGLI
EATLDAVRMRLRPILMTSLAFMLGVLPLAISTGAGSGSQNAVGTGVLGGMVSATILAIFF
VPVFFVVVRRRFSKRGEDIEHSHAVEHKS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattttttattgatcgccctatatttgcctgggtaatcgccataatcattatg
ttggcgggggctctggcattagtccaactaccggtatcgcaataccctacgattgcacca
ccggctgtttctatatctgcatcctatccgggtgctgatgcgcaaacagtacaggactct
gtcacacaggttatcgaacagaatatgaacggtatcgataacctgatgtatatgtcctcc
accagtgattcggccggtaacgcctctatcaccctaacgtttgactcaaaagcggatcca
gatatcgctcaggtacaggttcagaataaactgcaactggcgacacctctgttaccgcaa
gaagtacagcaaatggggatcagcgttaaaaaggccaccagtagcttcttaatggttgcc
ggttttatctctgaagatggctccatgagtcaggaagatatcgctgactatgtgggttca
aacgttaaagatcctctcagccgtaccaacggcgttggggatatacagctgtttggttca
caatacgcaatgcgcgtttggttagatcctaataagctgaataactattcgttaacgcca
cttgacgttaataacgccattaaagttcagaataaccagattgcagcaggtcagttaggt
ggtacaccaccggtaaaaggccagcagttaaactcatcgattatcgtgcagactcgttta
caaactccggagcaattcggtcagattctgttaaagattaataccgatggttcacaggtt
cgtctgaaagatgtggcaacgattgagttaggtggtgaaagctataacgtagttgctcgt
ttcgatggcaaaccagcatctggtctgggtattaagctggctaccggcgctaacgcactg
gataccgccgctgcggttaaagccgaattaaccgcgctggaaagatatttccccgcaggc
ctgaagatcgtttatccgtacgatacgacaccattcgttaagatttcgattaacgaagta
atcaaaacgctggtagaagcaattctgctggtatttatcgtcatgtacctgttcctgcag
aacctgcgcgcgaccctaatccctaccatggcagtaccggtggtgttattaggaaccttt
gcggtgttatccgcgtttggctactcaataaacaccctgacgatgttcgccatggtgctc
gccatcggcctgttggttgatgacgccatcgtggtagtagaaaacgttgaacggatcatg
gtggaagaaggtctgccgccaaaagaagccacgcggaaatccatggggcaaattcagggt
gcgttagtcggtattgccctggtactgtcggcagtattcgtaccaatggccttcttcggc
ggttctaccggtgcgatttatcgtcaattctccattacgatcgtttcggcgatggtgctg
tcggtattggtagcgatgattctgactcccgcgttgtgtgccaccattctgaagccggta
gcaaaaggtagccatggcgctaccaccgggttcttcggttggttcaacaacatgtttgag
aagaatactcatcactataccaatagcgttgctaacattttgggtagtaccggtcgctat
attctgatctatctggttctggttgttggcatggcattgctgtttattcgcctcccctct
tccttcctaccagaagaagatcagggtgtattcctggcagcagttcaattgcctcagggc
gctactcaggaaagaacccaaaaaattctggacgaagttagcgactactttattaccaaa
gaaaaagacaacgttgtttcggtgtttaccgttggcggcttcggctttagcggacaaggc
caaaatacgggtctggcatttattaaactgaaagaatgggatgaacgtccgggggcagat
aataaagtgtcagccatcgtcggtcgggcatctaaagcattctctcagattaaagacggt
atggtgtttgcctttaaccttccggccatcgttgaattaggtaccgcttctggctttgac
ttccagttgattgaccaggctggtttaggccatgaaaaattaactgaagcacgtaatcag
ctattaggcatgattgctaaacatccggatatgttggttggggttcgtccaaacggtctg
gaagatacgcctcagtttaaactgactatcgatcaggaaaaagcacaggcattgggcgta
tcaattagtgatattaaccaaaccctgtcaacagctttgggtggatcttatgtaaacgac
tttatcgaccgtggtcgtgtgaagaaagtttacgttcaagctgatgcgccattccgtatg
gtaccaaaggatattgataactggtttgtacgcggtacaaatggtcagatggttcctctt
tctgccttctccagcgcacactggcaatacggttctccacgtctggagcgttataacggt
ttaccatccatggaaattctgggtgaagccgcaccaggcaagagtagtggtgatgccatg
aaactgatggaagacttagcctctcagttaccgattggtattggttatgactggaccggc
atgtcctatcaggaacgtttgtcaggtaaccaggcaccgtcactgtatgccatttcactg
attgtggtattcctgtgtctggcagccttgtatgagagctggtcaattccgttctcagtt
atgctggttgttccacttggggttatcggtgctctggtagccaccaccgtacgcggtatg
gagaacgacgtttactttattgtaagcttgttaaccactgtcggactctcggcaaagaac
gccatattgattgtagagttcgccaaagacctgatggataaagaaggtaaaggtctgata
gaagcaacactggatgcggtacgtatgcgtttacgtccaattctgatgacttctctggcc
tttatgctcggggttctaccactggcaatcagtaccggtgcgggttccggctctcagaac
gcggtaggtaccggagttctgggcggtatggtcagtgcgactattctggctatcttcttc
gttcctgtgttcttcgtagtggtgcgtcgccgctttagtaagcgcggtgaagatatcgag
cattcacatgcagttgaacataaatcctaa
DBGET
integrated database retrieval system
