Limnobaculum zhutongyuii: EKN56_16960
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Entry
EKN56_16960 CDS
T06157
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag00521
Streptomycin biosynthesis
prag00523
Polyketide sugar unit biosynthesis
prag00541
O-Antigen nucleotide sugar biosynthesis
prag01100
Metabolic pathways
prag01110
Biosynthesis of secondary metabolites
prag01250
Biosynthesis of nucleotide sugars
Module
prag_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EKN56_16960 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EKN56_16960 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EKN56_16960 (rfbC)
Enzymes [BR:
prag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EKN56_16960 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QBH97932
UniProt:
A0A411WP09
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All DBs
Position
complement(3798491..3799045)
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AA seq
184 aa
AA seq
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MKVIETKLQGCLIIHPDVHGDNRGFFLETYQEERYAEYGIKYKFVQDNRSRSSFGVLRGL
HFQKTRPQGKLVSITRGEVFDVAVDLRPESKTFGEYVGVVLSEENNTQLFVPPGFAHGFC
VLSELADFSYKCTDYYSPSDEGGIIWNDPIINIEWPIKDPNLSEKDRLLPTFDDVKCNIL
GEKK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattgaaactaaattacaaggatgtctaattattcaccctgatgttcatggt
gataatcgaggttttttccttgaaacatatcaagaagaaagatatgcagagtatggtatt
aaatacaaatttgtacaagataatcgttcgcgctcatcatttggtgtgttaagaggatta
cactttcaaaaaacaaggccacaaggaaaattagtttctattactcgaggagaggttttt
gatgttgccgttgatttaagaccagaatcgaaaacttttggtgaatatgtaggggttgta
ctatcagaagagaataatacgcagctttttgttcctcccggttttgctcatggtttttgt
gtgctatctgaattagctgatttctcttataaatgcactgattattattctccttcagat
gaaggcggtataatatggaatgatcctataattaatattgagtggccgataaaagatcct
aatttatcagaaaaagatagattacttcctacttttgatgatgttaaatgtaacattttg
ggtgagaagaaatga
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