Pieris rapae (cabbage white): 111003029
Help
Entry
111003029 CDS
T05162
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03082
ATP-dependent chromatin remodeling
prap03083
Polycomb repressive complex
prap04213
Longevity regulating pathway - multiple species
prap04330
Notch signaling pathway
prap04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111003029
03083 Polycomb repressive complex
111003029
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111003029
04350 TGF-beta signaling pathway
111003029
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
111003029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prap03036
]
111003029
Enzymes [BR:
prap01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111003029
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
111003029
HDAC complexes
Sin3A-HDAC complex
111003029
BRAF-HDAC complex
111003029
REST complex
111003029
SHIP complex
111003029
MiDAC complex
111003029
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111003029
Heterochromatin formation proteins
Other heterochromatin formation proteins
111003029
Chromatin remodeling factors
NuRD complex
111003029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
111003029
NCBI-ProteinID:
XP_022129068
LinkDB
All DBs
Position
4:complement(6856227..6863520)
Genome browser
AA seq
481 aa
AA seq
DB search
MAMQPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGG
GGYTIRNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMSNQNTTEYLD
KIKNRLFENLRMLPHAPGVQVQAIPEDAVNDESDDEDKIDKDERLPQSEKDKRITGDGEL
SDSEDEGEGGRRDNRSYRVPQRKRPRLDKDNAKDDIKTEDNKDDVKNINMEEPKKELPPN
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcaaccgcacagtaaaaaaagagtgtgctattattacgatagtgatatcgga
aattattattatggccaaggacatcccatgaagcctcacagaatacgtatgacacataat
cttcttttaaactatggattatatagaaaaatggagatatataggccacataaagcaact
gctgatgaaatgactaaattccactcggatgactacatacgtttccttcgctccatcaga
ccagacaacatgtcagagtacaataagcagatgcaaagatttaatgttggtgaagattgt
ccagtgtttgatggtctatatgagttctgtcagctctctgcgggagggtctgttgctgcc
gccgtcaagttgaataaacaggcatctgaaatttgtatcaattggggtggagggctgcat
cacgcgaaaaaatctgaagcatctggtttttgctatgtcaatgatattgttctcggcatt
ttggagctgctcaagtaccaccagcgcgtactttacattgacatagacgtccaccatgga
gatggggtggaagaagcgttctacactactgacagagtcatgacggtgtccttccacaag
tatggagaatattttccaggcactggggatctacgtgatatcggagctggtaagggcaag
tactatgcagtgaatatcccacttcgggacggaatggacgacgaatcgtacgagtctatt
ttcgttcccattatttccaaagtcatggagaccttccaacccagtgcagtagtattgcag
tgtggagccgattctcttactggtgacagattgggatgcttcaacctaacagtgcgcggc
catggcagatgcgttgagcttgtgaagagatttggtcttccattcttacttgtgggcgga
ggaggttatacaatccgtaacgtatcacgttgttggacatacgagacttcggtggcgttg
ggcgttgagatagcaaacgagttgccatacaacgattactttgaatactttggaccggac
ttcaagttacacatctcgcccagcaatatgtccaatcaaaacacaactgaatatctcgac
aaaatcaagaatagactgtttgagaatctccgtatgttaccgcatgcgcctggagttcag
gtgcaagcaatcccagaagacgccgtcaacgacgaatcagatgacgaagataaaattgat
aaagatgaacgtctgccacagagtgaaaaggacaagcgaataacaggagatggagaatta
tcagattctgaagatgaaggtgaaggtggaagaagagacaaccggtcttatcgcgtacct
cagaggaagagaccgcgactcgacaaagataacgctaaggatgatatcaaaacggaagac
aacaaagatgacgtcaaaaacataaatatggaagaaccaaagaaagagttgccgcccaac
gcttga
DBGET
integrated database retrieval system