KEGG   Pieris rapae (cabbage white): 111003029
Entry
111003029         CDS       T05162                                 
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03082  ATP-dependent chromatin remodeling
prap03083  Polycomb repressive complex
prap04213  Longevity regulating pathway - multiple species
prap04330  Notch signaling pathway
prap04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111003029
   03083 Polycomb repressive complex
    111003029
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    111003029
   04350 TGF-beta signaling pathway
    111003029
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    111003029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:prap03036]
    111003029
Enzymes [BR:prap01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111003029
Chromosome and associated proteins [BR:prap03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111003029
   HDAC complexes
    Sin3A-HDAC complex
     111003029
    BRAF-HDAC complex
     111003029
    REST complex
     111003029
    SHIP complex
     111003029
    MiDAC complex
     111003029
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111003029
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111003029
  Chromatin remodeling factors
   NuRD complex
    111003029
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 111003029
NCBI-ProteinID: XP_022129068
LinkDB
Position
4:complement(6856227..6863520)
AA seq 481 aa
MAMQPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGG
GGYTIRNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMSNQNTTEYLD
KIKNRLFENLRMLPHAPGVQVQAIPEDAVNDESDDEDKIDKDERLPQSEKDKRITGDGEL
SDSEDEGEGGRRDNRSYRVPQRKRPRLDKDNAKDDIKTEDNKDDVKNINMEEPKKELPPN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctatgcaaccgcacagtaaaaaaagagtgtgctattattacgatagtgatatcgga
aattattattatggccaaggacatcccatgaagcctcacagaatacgtatgacacataat
cttcttttaaactatggattatatagaaaaatggagatatataggccacataaagcaact
gctgatgaaatgactaaattccactcggatgactacatacgtttccttcgctccatcaga
ccagacaacatgtcagagtacaataagcagatgcaaagatttaatgttggtgaagattgt
ccagtgtttgatggtctatatgagttctgtcagctctctgcgggagggtctgttgctgcc
gccgtcaagttgaataaacaggcatctgaaatttgtatcaattggggtggagggctgcat
cacgcgaaaaaatctgaagcatctggtttttgctatgtcaatgatattgttctcggcatt
ttggagctgctcaagtaccaccagcgcgtactttacattgacatagacgtccaccatgga
gatggggtggaagaagcgttctacactactgacagagtcatgacggtgtccttccacaag
tatggagaatattttccaggcactggggatctacgtgatatcggagctggtaagggcaag
tactatgcagtgaatatcccacttcgggacggaatggacgacgaatcgtacgagtctatt
ttcgttcccattatttccaaagtcatggagaccttccaacccagtgcagtagtattgcag
tgtggagccgattctcttactggtgacagattgggatgcttcaacctaacagtgcgcggc
catggcagatgcgttgagcttgtgaagagatttggtcttccattcttacttgtgggcgga
ggaggttatacaatccgtaacgtatcacgttgttggacatacgagacttcggtggcgttg
ggcgttgagatagcaaacgagttgccatacaacgattactttgaatactttggaccggac
ttcaagttacacatctcgcccagcaatatgtccaatcaaaacacaactgaatatctcgac
aaaatcaagaatagactgtttgagaatctccgtatgttaccgcatgcgcctggagttcag
gtgcaagcaatcccagaagacgccgtcaacgacgaatcagatgacgaagataaaattgat
aaagatgaacgtctgccacagagtgaaaaggacaagcgaataacaggagatggagaatta
tcagattctgaagatgaaggtgaaggtggaagaagagacaaccggtcttatcgcgtacct
cagaggaagagaccgcgactcgacaaagataacgctaaggatgatatcaaaacggaagac
aacaaagatgacgtcaaaaacataaatatggaagaaccaaagaaagagttgccgcccaac
gcttga

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