Poecilia reticulata (guppy): 103459989
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Entry
103459989 CDS
T05149
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103459989 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103459989 (ddx46)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103459989 (ddx46)
Spliceosome [BR:
pret03041
]
Complex A
U2 snRNP components
U2 related factors
103459989 (ddx46)
Complex B
103459989 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
103459989
NCBI-ProteinID:
XP_008400166
UniProt:
A0A3P9NED7
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDNKRSKKDDRDRSRRDRSRSRDRRRSRSRDRKR
ARRSRSRDRRRSRSRERKRSRSRSRTRRSRTGSPAKSKKSDEKAKSKEKEKESVEPVSEK
KKVKEEKEDEKVEDVSSKQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELE
EMKQGKKWSLEDDDDDDEEGPALMEVDEDEEEVEAEGKGDGKEKDAEEVKKEEDEAEKEA
PMEPQVEEDEVDPLDAYMEEVKQEVKKFNIGAMKGNDKKGATTVTKVVTVVKTRKQPMTH
KKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHTKIQYESYRKNFYVE
VPELAKMSTEEVNAYRLELEGITVKGKGCPKPIRTWVQCGVSMKILNSLKKQAYEKPTPI
QAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEGEGPISVIMTPTRELA
LQITKECKKFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVT
NLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILAKP
IEVQVGGRSVVCSDVEQHVLVIDEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKD
LMKASYPCLSLHGGIDQYDRDSIINDFKTGVCRLMVATSVAARGLDVKQLILVVNYCCPN
HYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDILKALELSGSAVPPELEQLWASFKD
QQKAEGKVIKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIE
SMFNSKKRVKDLSAPGASTGPAGGVTAAAAAPGGPAGLMPGSAGNNQKLEMAKRLALKIN
AQKNLGAEAQDVMQQATNAILRGDPIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEER
QAAEQAETVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPK
EGERKIYLAIESASELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtccagacactacaggaagcgctcagcgtcccgcggccggtcgggcagc
cggtcgaagagtcgctccccggacaacaagcgctcaaagaaagacgaccgagaccgaagc
aggagggatcggtccaggagcagagaccgcaggaggtcccggtccagagacaggaaaaga
gcccgtcggtcccgcagcagagaccggaggaggtccagaagccgggagaggaagaggtca
cgcagtcggagtcgaactcgcaggtcccgaaccggcagcccggcaaagagcaagaagtca
gacgaaaaagccaagagcaaagagaaggaaaaggagagcgtcgagccagtttcagagaag
aagaaggtgaaagaggagaaggaagatgagaaggtggaggacgtaagttcaaaacaagat
tttgaccaaaacaaactggaggaagaaatgaggaagaggaaggagcgtgtggagaaatgg
agagaggagcagaggaagaaggcgattgaaaacattggagagataaagaaagaactggag
gaaatgaaacagggcaagaaatggagcctggaggacgacgacgatgacgatgaggagggt
cctgctctgatggaggtggatgaagatgaagaggaggtggaggcggaaggaaagggggat
ggaaaagagaaggatgcagaggaagtgaagaaggaggaggacgaggctgagaaggaggcg
ccgatggagccgcaggtggaggaggacgaggtggatcctctggacgcctacatggaggag
gtcaagcaggaagtgaagaagttcaacatcggagccatgaaggggaacgataagaaagga
gcaacgacggtaaccaaagtggtgacggtggtgaagaccaggaaacaacccatgacgcac
aagaagaagggcgagctgatggagaacgaccaggacgccatggagtactcatcggaggaa
gaggaggtggacctgcagacggcgctgacgggttttcagaccaagcagaggaaagttctg
gagccggtcgaccacaccaagatccagtatgagtcgtaccgcaagaacttctacgtggaa
gttcctgagctggccaagatgagcacagaggaagtgaacgcgtacaggctggagctggaa
ggcatcaccgtcaaaggcaaaggttgtcccaaacccatcaggacctgggtgcagtgcggc
gtgtcgatgaagatcctcaactccctgaagaaacaagcgtacgagaagccgacgccgatc
caggcccaggccatccccgccatcatgtccggcagagacctgatcggcatcgccaagacc
ggcagcgggaagaccatcgccttcctgctgcccatgttccgccacatcatggaccagcgc
cccctggaggagggagaggggcccatctctgtgatcatgactcccaccagagagctggct
ctgcagatcaccaaggagtgtaagaagttctccaaaccgctggggctgcgagtggtgtgt
gtttacggagggacgggaatcagcgaacagattgcggagctgaagcgcggagcagagatc
atcgtttgcactccagggaggatgatcgacatgctgggcgccaacagcggccgggtcacc
aacctgcggagggtcacgtacgtggtactggacgaagcagacaggatgtttgacatgggc
tttgagccacaggtgatgcgtatcgtggacaacgtgcgtcccgaccgacagacggtcatg
ttctccgccaccttccccagagccatggaggcgctggcccgcaggatcctggccaagccc
atcgaggtgcaggtcggaggtcgcagcgtggtctgctcagatgtggagcagcacgtgctg
gtgattgatgaggagaagaagttcctgaagctgctggagatcttgggtcactaccaggag
aaaggctccgtcatcatctttgtggacaaacaggagcatgcggacggcctgctgaaggac
ctgatgaaagcctcctacccctgcctgtctttacatggaggcatcgaccagtacgaccga
gacagcataatcaacgactttaagacgggagtgtgtcgcctgatggtggccacctcggtg
gcggccagaggcctggacgtcaagcagctcatcctggtggtcaactactgctgccccaac
cactacgaggactacgtccaccgggcggggcgcaccggcagggcgggcaacaagggttac
gcctacaccttcatcacagaggaccaggctcgctacgctggcgacatcctaaaggccttg
gagctgtcagggtccgccgttcctccagaactggagcagctgtgggcttccttcaaggac
cagcagaaggcggagggtaaggtgattaagagcagcagtggcttctcagggaaaggcttt
aagtttgatgagacggagcatgctctggccaacgagaggaagaagctgcagaaagctgcg
ctgggactgcaggactctgacgatgaggacggcgccttggatatcgaggagcaaatagaa
agcatgttcaactctaagaagcgagtgaaggacctgtcggctcccggcgcgtccaccggt
cccgccggcggcgtcacggctgcagcggcggcccccgggggcccggcgggcctcatgccc
gggtccgctggaaacaaccagaagctggagatggccaaaaggctggcgctcaagatcaac
gcccagaagaacctgggagccgaggctcaggacgtgatgcagcaggccaccaacgccatc
ctgcgcggcgaccccatcatgaccccgtcggtgtcggccaagacgatcgcggagcagctg
gcggagaagatcaacgccaagctgaactacacgccggtggagaagctggaggaggagcgg
caggcggccgaacaggccgaaaccgtcaagagatacgaggaggagctggagatcaacgac
ttccctcagacggcccggtggaaggtgacgtctaaagaggcgttgcagaggattggagaa
tactctgaggcggccatcaccatcaggggaacgtatttccctccaggcaaagagccgaag
gagggagagcgaaagatttatctggctattgagagtgcgagtgaactggctgtgcagaaa
gccaaaacggagattacacggctaataaaggaagagctcatcagattacaaaattcctac
cagccaacaagcaaaggccgctacaaggtgctgtag
DBGET
integrated database retrieval system
