Poecilia reticulata (guppy): 103462480
Help
Entry
103462480 CDS
T05149
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pret01002
]
103462480 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103462480 (usp47)
Enzymes [BR:
pret01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103462480 (usp47)
Peptidases and inhibitors [BR:
pret01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103462480 (usp47)
Ubiquitin system [BR:
pret04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103462480 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
103462480
NCBI-ProteinID:
XP_008403532
LinkDB
All DBs
Position
LG3:complement(18481582..18502541)
Genome browser
AA seq
1376 aa
AA seq
DB search
MEMVPSEENQFVPKEGLFWSCRQSVIDEIKRISQIHNAAEEPRVLCIIQDTTSAKTVNER
LTLNLPASTTLSKLYEDVAHKAGYVNGSFDLAWGNAQNMAPLEHNSEMSLSDSSFEPGGK
KNFLQLTDKDGEQPQIASDESGTADSSGLDDSSQERFIGPLQRDGSAGGSGDYSSPSYSY
SSILSKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERAL
KPKSLLTFELFSVMVHSGSAAGGHYYAYIKSFGDGQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLIYRLKDPSRNSRFLSVEDFPEHIKSLVQKEKESEEQEKRQ
REIERNTCKIKLFCVHPVKMMMESKLEVHKDKTLREATEMAYKLMELEGVVPLDCCRLVK
YDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHV
VDLKTETIALPISVRAYLNQSITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKT
LKAEGFFRSNKVFVESSELTDHQVPFTDSLLWKLLDRHGNTIRLFVLLPEQSPGTLASRT
LCQKAGEDADGPFEGSKGNRKSVEAILEESTEKLKNLSLQQQQQGSSASDSQKSSDTSDF
EHIESPTQEADSNSSLCVAADSRELENRISGSSDTENQFVCEERSDSEVNNDRSTSSVDS
DILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEY
DDNGKSKAEARYLYFRAEPYSQDDASWNTHKCLVIHVDKRITLAAFKQNLEPYVGVPSSQ
FKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVFQLLVNEPEPCK
FLVDTVFAKGMTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEED
ISISSNWEVFLEVLDDSEKMKSMSQLAILTRKWNPATMKLGPFQEAILESSSVEELKEKL
SEMSGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRD
SRDEPLELSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPVRDLGQD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagggcttgttttggagt
tgcagacagagtgttattgatgaaataaagaggatttcgcagatacataatgcagctgag
gagcccagagtgctgtgcataattcaggacacgaccagcgcgaagacggtcaacgagagg
ctgaccctcaacctgcccgcttccaccactctctccaaactttacgaggacgttgcccat
aaagccggatatgtgaatggctcttttgacctcgcctgggggaacgctcaaaacatggca
ccgctggagcacaacagtgagatgtccctctctgattctagctttgagcccggcggtaag
aagaattttctccagcttacagacaaagatggagagcaaccacagattgcgtcggatgag
tcaggaacagcagatagcagcgggctggatgacagttcccaggagcgctttatcggcccc
ctgcaaagagacggcagcgcgggcggcagcggtgactacagcagtccatcgtactcctac
tcatccatccttagcaaatctgagactggttatgttggcttggttaaccaagcaatgacc
tgctatttgaacagtctcctccaaacactgtttatgactcctgagttcagaaatgcactc
tacaattgggagtttgaggaatccgaggaggatcccgtcaccagcatcccctaccagctg
caaaggctctttgttctgctgcagaccagtaagaagcgggcgattgagacgactgatgta
actcggagcttcgggtgggatagcagtgaggcctggcagcagcatgacgtccaggaactg
tgcagggtcatgtttgatgccctggagcagaagtggaagcagacagagcaggctgatctg
atcaaccagctgtaccagggaaagctgaaggattatgtgcgttgtttagagtgtggatat
gagagctggagaatcgacacttacctggacatccctcttgtgatcagaccctttggagcc
agtcaggcctacggaagtgtggaagaagctttgcaggcattcatccagccagaaaccttg
gacggccccaaccagtacttctgtgagcgctgcaaaaagaaatgtgatgcccgaaagggt
ctgaggtttctgcacttcccctacctgctgacgctgcagctgaaaaggtttgattttgac
tacaccactatgcatcgcatcaagcttaacgaccgcatgactttccccgaggagctcgac
atgagcccgttcattgatgtggaagacgagaagtcgcctcagacagagagctgcactgat
agcggagcagagaatgaaggcagttgccacagtgaccaaatgagcaatgatttttccact
gatgactgtgtggatgagggcatctgcttggacagcaccagtagcacggaaagggcattg
aagccaaagagcttgctgacctttgagttgttctccgtcatggtccattcgggcagcgct
gcgggcggacactactacgcctacatcaagtccttcggtgatggccagtggtacagtttc
aatgatcagcatgttagcaagatcacccaggatgatatcaggaagacatatggggggtcc
tcagggagcagaggctattactccagtgcctttgcaagttccacaaacgcttacatgctg
atttatagattgaaagacccgtcaaggaattcaaggtttttatctgtggaagatttccca
gagcacataaagagtttggttcagaaggagaaggaatccgaagagcaagagaagcgccag
agagaaatcgaacgaaacacttgcaagatcaagctcttctgtgtgcatcctgtcaaaatg
atgatggagagcaagttggaggttcataaagataaaactctcagagaagcaacagaaatg
gcctacaagctgatggagctggagggagttgtccctctggactgctgtcgcctggtaaag
tatgatgagttccacgagtatctggagcggtcgtacgaaggcgaggaagacacccccatg
gggctcctgcttggaggcgtcaagtcctcgtacatgttcgatttgctccttgagactcgc
cggcctgatcaggtcttccagccatataaacccggagaggtgatggtgaaggtccacgtt
gttgatctgaagacggagaccatcgcccttccgatcagcgtgcgagcgtacctgaaccag
tctatcactgaattcaaacagcttatagcacaggctacaggtctgtctgcagaaaccatg
cgcgtggtcttggagcggtgctacaacgacctcaggctgctctatgtcccaaacaagacg
ctaaaagccgagggtttcttcaggagtaacaaggtttttgtggagagctcagagttgact
gatcatcaggttcctttcaccgactcgctcttgtggaaactgttggatcgccacgggaac
acgatccgcctgtttgtcttgctgcctgagcaatctcctggcaccttggccagcagaact
ctttgtcaaaaagcaggagaagacgctgacggtcccttcgaagggtcgaagggcaacagg
aaatctgtggaagcgatactggaggagagcacggagaagttaaagaacctgtctctgcag
cagcagcagcagggctccagcgccagcgacagccagaaaagctccgacaccagcgacttt
gagcacatcgagtcgccaacgcaggaggcggactcgaactcttcgctgtgcgtggcggca
gacagcagggagctggagaaccggatatccggctcctccgacacggagaaccagtttgtt
tgcgaggagcgctcagactctgaggtgaacaatgaccgtagcacaagctcagtggacagc
gacatcctgagctccagccacagcagcgacacgctgtgcaacgcggacagcggccccatc
cagctggccaacggcctggattcacacagcatcaccagcagccgacgctccaaagcccac
gagggcaagaaggagacctgggacactgctgaggaagactctgggaccgacagcgagtat
gacgacaacgggaagagcaaggcagaagctcggtacctgtacttcagagcagagccttac
tctcaggatgacgcttcgtggaatacacacaaatgtctagtgattcacgtggacaagaga
ataacgttggcagcattcaagcagaacctggagccctacgtcggagtcccgtcgtcccag
ttcaaggtgtttcgagtttacgccaacaaccaggagtttgagagcgtacggctcaacgaa
acgctctcgtcgttctccgacgacaacaagataaccattcgactgggaagagcattaaaa
aagggtgaatacagagtcaaggtgttccagctgctcgtgaatgaaccagagccttgtaag
tttttagtggacacggtgtttgctaagggcatgactgtcagacagtccaaagaggagctg
cttcctcagttaaaagagcagtgcaagctcgacctcagcatcgacagggttcgtctcagg
aaaaagacgtggaagaatccaggaacggtgtttttggattaccacgtttacgaggaagac
atcagcatttcctcaaactgggaggttttcctggaagtcttggatgactcagagaagatg
aagtccatgtcgcagctggccattctgacccggaagtggaacccggctactatgaagctg
ggacctttccaggaagccattctggagagcagcagtgtggaagagctaaaggaaaagctc
agtgaaatgagtggtattcccctggagaacttggaatttgcaaagggcaggggaacgttt
ccatgtgatatatccgtgttggaaatccatcaggatttggactggaatccaaaagtttcg
actctgaatgtgtggcctctgtacatctgtgacgatggagccgtggtcttctacagggac
agcagagacgaacctctggagctgtctgaggacgagcgcaacgagctgatgaagaaggaa
agcagccgcctgttgaagacgggacaccgcgtcagctactcgccgcgcaaagagaaggcc
ctcaagatctacctggacggcggccccgtgagagacctggggcaggactga
DBGET
integrated database retrieval system
