Poecilia reticulata (guppy): 103462919
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Entry
103462919 CDS
T05149
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103462919
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103462919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
U-box
Taxilin
V_ATPase_I
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
103462919
NCBI-ProteinID:
XP_008404202
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All DBs
Position
LG3:complement(33883573..33894575)
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AA seq
554 aa
AA seq
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MEQNQLDSETFSCLICLNLLKDPVTTSCGHSYCMNCIKNHWDGEDQKRIHSCPQCRETFT
LRPVLKKNTMLAALVEQLKKTGLQAVPADHCFAGHKDVACDFCTGRKQNAIKSCLVCLAS
YCEKHLQPHYDSAAFKKHKLVEPSKNLQDNICCKHDEVMKIFCRTDQKCICYLCTMYEHK
GHDTVSAAAERTERQRELEERRGNIQQRIQDREEDVKLLQQEVEAINHSADKAVEDSEKI
FTQLIRLLQKRSSEVKQQIRSQQETEVSRVKDVQEKLEQEISELKRKDAELEQLSHTEDH
NQFLLNYPSLPALSGSTHSSSIIGRPLRYFEDMTAAVTEIRDKLHGVLRDTWTNILHKLN
DVDVLLPGPEPKTRAGFLKYSCEITLDPNTAHTQLLLSEGNRKVTGINPDQSYSSHPDRF
TNWGQVLSRESLTGRCYWEVERWGTVDVAVAYKNISRAGDKNECGFGNNEKSWALECSQN
SFHFGHKNIWTPISAPVPSRVGVYLDHRAGILSFYSVSETMTLLHRVQTRFTEPLLAGVW
VGNPGDSAEFCKLR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcagctggactcagaaactttctcctgtttgatctgtctgaatctactg
aaggatccggtgacgacttcctgtggacacagctactgcatgaattgtattaaaaatcac
tgggatggagaggatcagaagaggatccacagctgccctcagtgcagggagacattcaca
ctgaggcctgtgctaaagaagaacaccatgctagcagctttagtggagcagctgaagaag
actggactccaagctgttcctgctgaccactgctttgctggacataaagatgtggcctgt
gatttctgcactggaagaaaacagaacgctatcaagtcctgtttagtctgtctggcctct
tactgtgagaaacaccttcagcctcattatgattcagctgcttttaagaaacataaactg
gtggagccgtccaagaacctccaggacaacatctgctgtaagcatgatgaggtgatgaag
atcttctgtcgcactgatcagaagtgcatttgttatctctgcacaatgtatgaacataaa
ggccatgacacagtctctgctgctgcagaaaggactgagaggcagagagagctggaggag
agacgaggaaacatccagcagagaatccaggacagagaggaagatgtgaagctgcttcaa
caggaagtggaggccatcaatcactctgctgataaagcagtggaggacagtgagaagatc
ttcacccagctgatccgtctcctccagaaaagaagctctgaggtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcaggag
atcagtgagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcac
aaccagtttctcctcaactacccctcactgccagcactcagtgggtcgacacactcatcc
agcatcattggccgtcctctgagatattttgaagacatgacagcagctgtgacagagatc
agagataaactacacggcgtcctgagagatacatggacaaacatcttacataaacttaat
gatgtggatgttttactgccaggaccagaaccaaagaccagagctggattcttaaaatac
tcatgtgaaatcactctggatccaaacacagcacacacacagttgttactatcagagggt
aacaggaaagtgacaggaataaatccggatcagtcttattccagtcatccagacagattc
actaattgggggcaggttctgagtagagagagcctgactggacgttgttactgggaggtg
gagaggtgggggacagttgatgtagcagtcgcatacaagaatatcagcagagcaggagat
aagaatgaatgtggatttggaaataatgaaaagtcttgggctttagagtgctcccaaaac
agttttcactttggtcacaagaacatctggacccccatctcagctccagttccgtccaga
gtcggagtgtacctggaccacagagcaggtattctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccagattcactgaaccgctactggctggagtttgg
gttggtaaccctggagactctgcggagttctgtaaactcagatag
DBGET
integrated database retrieval system
