Poecilia reticulata (guppy): 103470674
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Entry
103470674 CDS
T05149
Name
(RefSeq) general transcription factor IIH subunit 2-like isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03022
Basal transcription factors
pret03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103470674
09124 Replication and repair
03420 Nucleotide excision repair
103470674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103470674
03400 DNA repair and recombination proteins [BR:
pret03400
]
103470674
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103470674
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103470674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
C1_4
DZR
Motif
Other DBs
NCBI-GeneID:
103470674
NCBI-ProteinID:
XP_008417514
UniProt:
A0A3P9P811
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All DBs
Position
LG9:complement(30696810..30711816)
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AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILYQSKRKRVTQSHAQVRLGMMRH
LYVVIDCSRSMEDQDLKPNRLTSTLKLMEGFIDEYFDQNPISQVGIITTKNKRAEKLTEL
AGNPKKHIAALKKAVDSSCVGEPSLYNSLRLAIQTLKHMPGHTSREILIILSSLTTCDPA
NICELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMHHVKPPP
ASFSSESSLIRMGFPQHTVTSLSDQDVKPSFSMSHLDSGGGPALTLGGYFCPQCQAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFIESPADNYQQNKFCQACQGQLKDKNVLAC
PLCCSVFCGECDLFIHESLHCCPCCIHNRTAT
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagccagagagagccaagcgctgggaaggaggctatgaaaggacatgggag
gtgcttaaggaggatgagtcaggctcccttaaagccacagtggaagagatcctgtaccag
tccaaaagaaagagggtgacacaaagccatgcacaagtgaggcttgggatgatgcgccac
ctatatgttgttattgactgttcacgcagtatggaggaccaggacttaaaacccaaccgt
ctcacctctaccctgaagctgatggagggattcatcgatgaatactttgaccagaatccc
atcagccaggttggcattatcaccaccaaaaacaaaagggctgagaagcttacagaactt
gcaggaaatccaaagaagcacattgctgctctgaagaaagcagttgacagctcatgtgtc
ggagagccttctctgtacaactctctcaggctggctatacagaccctcaagcacatgcct
ggacacaccagcagagaaatcctcatcatcctcagcagcctgaccacatgtgacccagct
aacatctgtgagctaatcaagactctgaagtctcttaaggtgcgagtgtcagtaattggg
ctctcagcagaagtccgagtgtgcacggttctgaccagagagacgggtggatcctaccat
gttatcctagatgagagtcacttcaaagagctgctcatgcatcatgtcaaacctccgcca
gcaagcttctcatcggaaagctctttaatacgaatgggttttcctcagcacactgtaacc
tctctgagtgatcaagatgtcaaaccgtcgttcagcatgtctcatctggacagtggtggt
ggcccggctctgactctaggaggatacttctgtccgcagtgccaagcaaaatacacagag
cttcctgtggagtgtaaagtctgtggtttgacgctggtgtctgctccacatctggccaga
tcctttcatcatctgtttcccctccaagcatttattgagagtccagctgataattatcag
cagaataagttctgtcaggcttgtcaagggcagctgaaagataaaaatgtcctcgcctgt
cctttgtgttgcagtgtgttctgtggggagtgtgatctcttcatccatgaatcactgcac
tgctgtccctgctgcattcacaatcggactgctacatga
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