Poecilia reticulata (guppy): 103472381
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Entry
103472381 CDS
T05149
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103472381 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103472381 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pret04147
]
103472381 (vps28)
Membrane trafficking [BR:
pret04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
103472381 (vps28)
Exosome [BR:
pret04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103472381 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
103472381 (vps28)
Exosomal proteins of colorectal cancer cells
103472381 (vps28)
Exosomal proteins of bladder cancer cells
103472381 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
103472381
NCBI-ProteinID:
XP_008420218
LinkDB
All DBs
Position
LG11:complement(14130393..14133253)
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AA seq
223 aa
AA seq
DB search
MFHGIAGSGGVGAAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVSPSEYTASCSRLLVQYKAAFKQVQGSDVGSIDEFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccacgggatagcaggcagtggaggagtcggtgcagctccggctaacaaacctgag
ttatatgaggaggtcaaactttacaaaaacgcacgggaacgagaaaagtacgacaacatg
gccgagttgtttgctgttgtaaagactttgcaggcattggagaaggcttacatcaaagac
tgcgtatcccccagcgagtacacggcttcctgctccagactcttggttcaatataaagct
gctttcaaacaggtgcaaggctccgacgtgggctccatcgatgaattctgcaggaaatac
agacttgactgcccacttgcaatggagaggattaaggaagatcgaccaattaccatcaaa
gacgataagggcaacctgaaccgctgcatcgcagatatagtttctctcttcatcactgtt
atggacaagctgagactggagatcagagccatggatgagatccaaccagacctgagagag
ctgatggaaaccatgaacaggatgagcaacatgcctccagactctgaggcaaaggacaaa
gtgagcctctggttgaccacccttagcagcatgtctgcctcagacgagctggatgataac
caggttcgccagatgctcttcgatctggaatcagcctacaacgccttcaaccgcttcctc
cactcttcctaa
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