KEGG   Poecilia reticulata (guppy): 103472452
Entry
103472452         CDS       T05149                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103472452 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pret03041]
    103472452 (sf3b4)
Spliceosome [BR:pret03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103472452 (sf3b4)
 Complex B
    103472452 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    103472452 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 103472452
NCBI-ProteinID: XP_008420321
LinkDB
Position
LG11:15433908..15437189
AA seq 394 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPTPVLTAMGTAMSIPGLPPP
GAFPPVPPPGTMPPAMPPSMGMPPTAGGVPQVSAGGPPPGPPPFPPGNMPPGMPQMPMPP
PAPPGMVPPPPAPPGSAQRAPLPPNMPPPPMGMPPRAPYPMAPPVPPGMRGPPPPMPPPG
YGAAPPGPPRPPPFGFQRAPPMPPRPPGGPPRVP
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcagcgggaccaatatcggaaagaaatcaagatgcgactgtgtatgttggaggcttg
gatgagaaggtgtctgagccgttgctgtgggagctgttcctgcaggccggtcctgtggtc
aacacacacatgcccaaagaccgggtcactggccaacatcaaggttatggctttgtggag
tttcttagtgaagaggatgctgattatgccataaaaatcatgaatatgataaaactttat
ggcaaaccaattagggtcaataaggcctcagcacacaacaaaaacctggacgttggtgca
aacatcttcatcggtaatttggacccggagattgatgaaaaacttctctatgacacgttc
agtgcgtttggtgtgatcctccaaacaccgaagatcatgcgagaccccgacacgggtaac
tctaagggttacgctttcatcaattttgccagttttgatgcttcggacgcggctatcgag
gccatgaacggccagtacctctgcaacagacccatcacggtgtcgtacgcatttaaaaag
gattccaaaggggaacgccacggttcggccgcagagcgactgctggctgcacagaacccg
ctctctcaggccgacaggccgcaccagctgtttgcagatgctccgcccccgccgtctgca
ccgacaccagtcctcactgcgatgggaacagcaatgtccattccaggtctcccgcctcct
ggtgcgtttcctcctgttccccctcctggaacgatgcctccagcaatgccgccttctatg
ggcatgcctccaacagcgggaggtgttccacaagtgtctgccggcggacctccacctgga
ccgccaccattccctcctggcaacatgcctccaggtatgccccagatgcccatgccgcct
cctgctcctcctggcatggtgcctccacctccagctcctccaggatcggcccagagggct
ccgctgccccccaacatgccgccaccaccaatgggcatgcctccccgggcaccatacccc
atggctcctcctgtgcctccaggaatgagagggcctcctcctcccatgcctccgcctggc
tacggcgcagctcctcctggtcctcctcgtccgcctccctttggttttcagagagcgcct
ccgatgccacccaggcccccaggcggccctcctcgtgtaccttaa

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