Poecilia reticulata (guppy): 103472470
Help
Entry
103472470 CDS
T05149
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103472470
Membrane trafficking [BR:
pret04131
]
Protein recycling
Others
Others
103472470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Toxin_18
APC1_3rd
Motif
Other DBs
NCBI-GeneID:
103472470
NCBI-ProteinID:
XP_008420368
LinkDB
All DBs
Position
LG1:complement(32734296..32893670)
Genome browser
AA seq
1206 aa
AA seq
DB search
METEVRFCPKWHGALRFGLFLLLPGLLGVAEAEITCRSCRDGNMWRGAQELLLRVETSGP
AAGAKGEVLGSGDRTGKVPCEPGPAGCAPDRGQLRRERITDSGKVSQHKDGVGSTPRRFR
RDSGGDAVRSAPAEGATAAAAAAAWRRAARWSGEERRAAGARQEELKLNSSTFALTGDSS
HNQAMVHWSGHNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSY
LYVSPNNKRKIMLLTDPEIESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSH
DQKLYSSVEFGRRWQLVHEKVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQN
CTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTAGRPVYYVSAKRDVFTPMKLPKYTLPKE
LHVISTDENRVVAAVQEWNQNETYNLYVSDTSGVFYTLALENVVSSMGLEGNVMVDLYEV
AGIKGMFLANKKTDNQVKTYITYNRGRDWRLLQAPSRDLRGNSIHCVLPYCSLHLHLHVS
ANPYTSGNIASRESAPGIIVASGSIGSELTTSNVSAFITSDAGNTWRQIFDEEYAVLYLD
QGGALVAIRHTPLPIRHLWLSFDEGRQWNKYSFSNTPLFVDGVLGEPGEETLIMTIFGHF
SHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKT
YSVAMTSAPCDCTEADFECDYGYERRSDGKCSPAFWFHPSSMSRSCTTGMTFLNSTGYRK
VVSNNCTAGVIAEYTARRQHCPVQAPKGLHLVTSEGRLTATLGANVTFLVFLEEGDGART
SITVDFGDGHALTYSNVSSIEDGIKHIYKSVGIYRVTATGENSLGSETATLFLHVTCQLE
HIHLSAPFVVVRNKEVNLTAVLHPSQVGTVTYIWWIGNNTEPVITLEGSVACTFSREGIN
TVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDEHNPDVAEWRQDVSRVIRNALIQ
ATGVREDLLLVTVLPGLPTAAEFFLLPDKQLTEGKAEKSSAHLDQLSDLLLNALNQNLVQ
FTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVAGLAVFVIYKFKRKIPGLN
VYAQMQNDKEPEVMSPANPSEATPSSPQDLVPSLEILDTELNSRPIGCMKPHVHVKFSTE
LPTYIV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaggtcaggttctgcccaaagtggcacggtgcgctccggttcgggctcttc
ctcctcctgcccggcttgcttggcgtcgccgaggctgagataacctgcaggtcatgccgg
gatgggaatatgtggcgcggcgcgcaggaattactgctgagggttgaaacaagtggtccc
gctgccggggcaaagggggaagttttggggagcggagaccggaccgggaaggtcccctgc
gagccgggccccgctggatgcgctccagaccgggggcagctgaggcgggagcggattaca
gacagcgggaaagtttcccaacacaaggacggtgttggttcgactccacggcgcttcagg
agggacagtggcggggatgcagtcagatcagccccggcagagggagcgacggcggcggcg
gcggcggcggcgtggcgcagagcggcgcgctggagcggagaggagcgcagagcggccggc
gcgcggcaggaggagttaaagctcaacagctccacgttcgccctgaccggggactcatcc
cacaaccaggccatggtgcactggtccggccacaacagcagcgtaattctgatgctaacc
aaactctttgacttcaacctcaacagcgtgacggagagttcgttatggaggtcaactgac
tatggagcaacgtaccagaagctgaacgacaaagtgggagcgaagacgatcctcagctac
ctgtatgtgagccccaacaacaagaggaagattatgctgctgacggatccggagatagag
agcagcctcctgatcagctctgatgaaggagccacataccagaagtaccgactcaacttc
tacatcctgagcctcctgtttcaccccgagcaggaggactggatcctggcatacagccac
gaccaaaagctttacagttctgttgagtttggaagaagatggcagctggtgcacgagaaa
gtggctcctaatcgtttctattggtccaagatgggtttggacaaagagccgggcttaatt
cacctggaaaccagcatctctgaaggacaggcgctgtacgtcacctgcaagctgcagaac
tgcacagacgccaacaagggcaaaccattccccggatacattgaccccaattccctggtg
gtgcaggatgagtatgtgtttgtccaggtgtccactgcagggaggccggtctactacgtt
tctgcaaaacgagacgtctttaccccgatgaagctgccaaagtacaccctgcccaaggag
ctgcatgtgatcagtacagatgaaaaccgcgtggtggctgctgttcaggagtggaaccag
aatgaaacctacaacctgtacgtgtcggacacttcgggcgtcttctacactctggctctg
gagaacgtggtcagcagcatgggcctggagggcaacgtcatggtggacctctatgaggtg
gcaggaataaagggcatgttcctggccaacaaaaagactgataaccaagtaaagacgtac
atcacttataaccgcggcagagactggaggttactgcaggcccccagcagagacctgaga
ggcaacagcatccactgtgtgctgccgtactgctcattacatctccatcttcacgtgtct
gccaacccctacacatctggaaacatcgccagcagggagtcggcgccggggatcatcgtc
gcctcaggctccatcggttcagaactgaccaccagcaatgtgagcgcgttcatcacctcc
gatgcaggaaacacgtggagacagatctttgatgaggagtacgccgtgctttatctcgac
caaggtggagccttggtggcaataagacacactccacttcccatccgacacctatggttg
agcttcgacgaaggacggcagtggaacaagtacagcttctccaacacgcctctgtttgtg
gacggggtgctgggcgagccgggcgaggagacgctcatcatgacgatctttgggcacttc
agtcatcgctctgagtggcagctggtgaaaatagatttcaggtccatcttcaacaggaga
tgcaccgaggcggactaccagacgtggcacctacacaaccagggtgagccgtgtctgatg
ggcgtgaagagaatctaccggaagctgaagccgacctccaggtgcgtcatgggaaagacg
tactccgtggcgatgacctcggctccctgcgactgcacggaggcggacttcgagtgtgat
tacggctatgagaggcggagtgatgggaagtgcagccccgccttctggttccatccgtcc
tccatgtcccgcagctgcaccacggggatgacgttcctcaacagcacgggctacaggaag
gtggtgtccaataactgcacagctggagtgatagcagagtacacggcccggcgacagcac
tgccccgtccaggctcccaaaggcctccacctggtcaccagcgagggccggctgaccgcc
acgctgggcgccaacgtcaccttcctggttttcctggaggagggagacggagcgaggacc
agcatcacggtggactttggagatggtcacgctctgacctactccaacgtgagctccatc
gaggacggcatcaagcacatctacaaatccgtgggaatctatcgggtgacggccaccggg
gagaacagcctcggttctgagaccgccacgctcttcctgcacgtcacatgtcagctggag
cacatccatctctctgctccctttgtggtggtgaggaacaaggaagtgaacctgaccgcc
gttctgcatcccagccaagtgggaacggtcacctacatctggtggatcggaaataacacc
gagcctgttatcaccctggagggaagcgtggcgtgtacgttctccagggaagggatcaac
acagtcacggtgcaggtgtctgctgggaacgccatcctgcaggacaggaaaactatcgct
gtccacgaatatttccgatcccacctgctggccttctcctcgaacctggacgaacacaac
ccggacgtggctgagtggaggcaggatgtgagccgggtgatccggaacgctctgatccag
gcgacaggcgtacgggaggacctgctcctggtcaccgtcctgccaggtctaccaacagca
gccgagtttttcctgctgcctgacaagcagctgaccgaggggaaagcagagaagagctcg
gctcatttagatcagctctctgacctcctgctgaacgccttgaatcagaacctggtccag
ttcacgctgcggccgggggtccaggtcaccgtgtacgccgctcacctgtcggcagcgccc
ctggtggacaccagcgagaaccacagtggctctgccatgctaatgctgctctctgtagtg
gttgcgggtttagctgtgtttgtcatctacaaatttaagaggaagatcccaggcctcaac
gtctatgcgcagatgcagaacgacaaagaaccagaagtgatgagtccagccaatccctca
gaggccacgcccagctcaccgcaggacttggtgccttctctggagattctggacaccgag
ttgaactcgcggcccatcggatgtatgaaacctcatgtacatgtgaaattctccacagaa
ctccccacatacatcgtctga
DBGET
integrated database retrieval system
