Poecilia reticulata (guppy): 103476089
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Entry
103476089 CDS
T05149
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103476089
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103476089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Prok-RING_4
zf-RING_10
LMBR1
DivIVA
PI3K_P85_iSH2
ALS2CR8
DUF5446
Motif
Other DBs
NCBI-GeneID:
103476089
NCBI-ProteinID:
XP_008426390
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All DBs
Position
LG14:17439027..17458909
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AA seq
593 aa
AA seq
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MQPEQITSMSDRLWSTVTMADHTSPDYFSCSLCQSLLRDPVAIPCGHSFCMDCIDGYWNE
ADYTGIYICPQCKITFTQRPVLRPNATLTMVAEKIKKSGLNVNLSASQANVYAGTNDVPC
DFCTGKKLKAVKSCLNCLASYCEKHLRPHYESATFKRHKLVDELGNLDRKICPQHQKSLE
LFCRTDQMCICAICTVSEHRGHDIVSAEAERGEKQKLLGVSQAEIKQKCQERVKELEELK
TAVDSLKNSAQRAMVESQKMFEDMIRSIERMRSEVTKLIGINEKAAFNQAEALIERLEQE
IDELKKKETGLKQLYSTEDHIHFLQNFNYLCTPTDDGFIPKVTVNPDFSFASVRKAVAEI
KERLEEFGREELLKISKTVNEVPVYTTESRTLDRRSRGKEMTVDNTPPPEPKTRADFIKY
FCQLKLDPITAYKELYISEGSRKVIRTRDLQPYSDSPERFDSFAQVLCREALSGSRFYWE
IEWSGEFSIGVAYRSISRKGKGSLCLLGYNDKSWSLLCSDTGYSAWHNRVDKSVNGPHSP
RIGVYLDHTAGVLAFYSIGSSSMTLLHRFQTTFVEPVYPGFGVGTSVKICNVK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgagcaaattacatcaatgtctgaccggctttggagcaccgtcactatggcc
gaccacacgtctcctgattatttcagctgctccctgtgtcagagtctcctcagggaccct
gtggccatcccgtgcggccacagcttctgcatggactgcatcgatggctactggaacgaa
gcggactacaccgggatctacatctgtccccagtgcaagatcacgttcacccagaggccc
gtgctgcgacccaatgccaccctcaccatggtggccgagaagatcaagaagagcggcctg
aacgtcaacctgagcgcgtcgcaggcaaatgtctacgcggggaccaacgacgtgccctgc
gacttctgcacggggaagaaactcaaggcagtcaagtcgtgcctgaattgcctggcgtcg
tactgcgagaagcacctgagaccgcactacgagtcagccacgttcaagaggcacaagctg
gtggacgagctggggaacctggacaggaagatctgcccgcagcaccagaagtccctggag
ctcttctgccggacggaccagatgtgcatctgtgccatctgcaccgtcagcgaacacaga
ggccacgacatcgtgtccgccgaggcagagaggggcgagaagcagaaactgttgggagtt
tcccaagctgagattaagcaaaaatgtcaggaaagggtaaaagagctggaggaactcaag
actgctgtggattcacttaagaactcagcccagagagccatggtggagagccagaagatg
tttgaggacatgattcgctccatcgagaggatgaggtcggaggtgaccaagctgatcggc
atcaacgagaaggcggctttcaaccaggccgaagctttgatcgagcgactggagcaggag
atcgacgagctcaagaagaaggagaccggcctcaagcagctctacagcaccgaagaccac
atccattttctgcagaactttaactacctgtgcacgccgaccgatgacggcttcattccc
aaggtgaccgtcaaccccgacttctcctttgcctccgtcaggaaggctgtggcggagatc
aaggagcgcctcgaggaattcggcagggaggagctgctcaagatttccaaaacagtaaat
gaggtcccagtttacacgacggagagccggacattggacagaagaagcagaggtaaagaa
atgacggtggacaatactcctcctccagagccaaagaccagagctgattttatcaaatac
ttctgccagctgaagctggaccccatcaccgcctacaaagagctctacatctccgagggc
agcaggaaggtcatccgcaccagagacctgcagccctacagcgacagcccagagaggttc
gacagcttcgcccaggtgctgtgccgcgaggcgctgtccggcagtcgcttctactgggaa
atcgagtggagcggggagttctccatcggcgtggcctaccggagcatcagccggaagggc
aagggctcactgtgcctgctgggatacaacgacaagtcctggagcctcctctgctccgac
acgggatactccgcctggcacaaccgggtggacaaatccgtcaacgggccgcactcaccc
aggataggcgtgtacctggaccacacggcgggggtgctggcattttacagcataggcagc
agctccatgacgctcctgcacaggtttcagaccacgtttgtggaacccgtctatccgggc
ttcggagtcggaacatctgtgaagatctgcaacgtcaagtga
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