Pseudomonas rhizosphaerae: LT40_12825
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Entry
LT40_12825 CDS
T03339
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00020
Citrate cycle (TCA cycle)
prh00785
Lipoic acid metabolism
prh01100
Metabolic pathways
prh01110
Biosynthesis of secondary metabolites
prh01120
Microbial metabolism in diverse environments
prh01200
Carbon metabolism
prh01210
2-Oxocarboxylic acid metabolism
Module
prh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
prh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT40_12825
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LT40_12825
Enzymes [BR:
prh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LT40_12825
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AIS18219
UniProt:
A0A089YRG0
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All DBs
Position
complement(2831252..2834083)
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AA seq
943 aa
AA seq
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MQESVMQRMWNSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPAEGSTATDVAH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGMTNADLDTTFRAGDLFIGKEEASLREILEALQQTYCRTIGAEFTHIT
DSEQRSWFQQRLESVRGRPSMSAESRSHVLERVTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRDLFDEFEGKKKVELGSGD
VKYHQGFSSNVMTTGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDAVGDKVLPISL
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPYDARSTEYATDVAKM
IQAPILHVNGDDPEAVVFVTQLAIDYRMQFKRDVVIDLFCYRRRGHNEADEPSGTQPLMY
QQIAKQRTTRELYAESLIKAGVLDESSVQSQIDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAATYIPLQNLYSGQPRF
DLYDSFLSEEAVLAFEYGYSTTSPNALVIWEAQFGDFANGAQVVVDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAVSTLEDLAEGSFQTVIPEIDTLDAAKVTRLVLCSGKVYYDLLEKR
RAEGREDVAIVRIEQLYPFPEDDLMEAIAAYTNLEHVVWCQEEPMNQGAWYSSQHHLRRS
MSNHKKTLVLEYAGRDASAAPACGYASMHAEQQAKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagcgcccacctatccggtggtaacgct
gcctatgtggaagagctctatgagctttacctgcacgaccctaacgctgtgccagaggaa
tggcgcacctactttcagaagttgcctgccgaaggcagcactgccaccgacgtagcacac
tccaccatccgtgatcatttcgtcctgctggccaaaaaccagcgccgtgcccaaccggtt
tccgccggtagcgtgagcagcgagcacgaaaagaagcaggtggaagtgctgcgattgatt
caggcctaccggatgcgcggccaccaggcagcccaactggacccgttggggctgtggcaa
cggcctgctccggcagacctgtcaatcaaccattacggcatgaccaatgccgatctggat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaggcgagcctacgtgaaata
ctcgaggctttgcagcagacatattgccgcaccattggcgccgagttcacccatatcacc
gattcggagcagcgcagctggttccagcagcgtctggaaagcgtgcgtggccggccatcg
atgtcagccgaaagccgcagccatgtgctcgagcgcgtgacggctgccgagggcctggaa
aaatacctgggcaccaaatacccaggcaccaagcgtttcggcctggaaggtggcgaaagc
ctgattccgatgctggacgagctgatccagcgttcgggctcctacgggaccaaggaagtc
gtgatcggcatggcccaccgcggccgcctcaacgtgctggtcaataccttcggcaagaac
cctcgcgacctgttcgacgagttcgaaggcaagaagaaggtcgagctgggctccggtgac
gtcaagtatcaccaggggttctcgtccaacgtgatgaccacaggcggcgaagtgcacctg
gccatggcgttcaacccgtcccacctggagatcgtgtctccggtggtcgagggttcggtg
cgtgctcgccaggaccgtcgcaacgatgcggtcggcgacaaggttctgccgatctcgctg
cacggcgacgctgcgttcgccggccagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggcactgtccacatcgtgatcaacaaccaggtcggtttc
accatcagcaacccgtacgatgcgcgctccaccgagtacgcgaccgacgtggccaagatg
atccaggcgccgatcctgcacgtgaacggcgatgatccggaagccgtggtgttcgtcacc
cagctggccatcgactaccgcatgcagttcaagcgcgatgtggtcatcgacctgttctgc
taccgtcgtcgcggtcacaacgaggccgacgagccaagcggtacccagccgctgatgtac
cagcagatcgccaagcagcgcactacgcgcgagctgtatgccgaaagcctgatcaaggcc
ggcgtgctcgacgaaagcagcgtgcagagccagatcgacgaataccgcaatgcgctggat
aacggcctgcacgtggtgaaaagcctggtcaaggagccgaacaaggagctgttcgtcgac
tggcgtccttacctgggccatgcctggacggcacgtcacgacacgcgtttcgacctcaag
accctgcaggagctgtccgccaagctgctggaaattccagaaggcttcgtggtgcagcgt
caggttgccaagatctacgaggatcgccagaagatgcaggccggtggcttgccgatcaac
tggggctatgccgagaccatggcgtatgccaccttggcgttcgaaggccatccgatccgc
atgaccggccaggacatcggccgtggcaccttctctcaccgccacgcggtgctgcacaac
cagaaggatgcagcgacctacatcccgctgcagaacctttacagcggccagccacgtttc
gacctgtatgactccttcctctccgaggaagcggtactggcattcgaatacggctactcg
accacttcgcccaatgcgttggtgatctgggaagcgcagttcggtgacttcgccaacggt
gcacaggtcgtggttgaccagttcatcaccagcggtgagcacaagtggggccgtctgtgc
ggtctgaccatgctgctgccgcacggttacgaagggcagggcccggagcactcctcggcg
cgtctggagcgttacctgcagttgtgcgccgagcacaacatccaggtgtgcgtaccgacc
acgcccgcgcagatctaccatctgctgcgtcgccaggtgatccgtccgctgcgcaagccg
ctgatcgtgttgacccccaagtcgttgctgcgtcacaagctcgcggtttcgaccctggaa
gacttggccgaaggctcgttccagaccgtcatcccggaaatcgataccctggacgccgcc
aaggtgacgcgtctggtgctgtgcagcggcaaggtctactacgacctgctggagaagcgc
cgtgccgaaggccgcgaagatgtcgccatcgtgcgtatcgagcagctgtatccgttccct
gaagacgacttgatggaagcgatcgctgcctacaccaacctggagcacgtggtctggtgt
caggaagagccgatgaaccaaggtgcctggtacagcagtcagcatcatttgcgccgcagc
atgagcaatcacaagaagaccctggtcctcgagtatgccggccgtgacgcatcggctgca
ccggcttgtggttacgcttcgatgcatgccgagcagcaggccaaactgctgcaagatgcc
ttcaccgtttaa
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