Porifericola rhodea: PZB74_12275
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Entry
PZB74_12275 CDS
T09201
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
prho
Porifericola rhodea
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prho03016
]
PZB74_12275 (mnmE)
Transfer RNA biogenesis [BR:
prho03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PZB74_12275 (mnmE)
Prokaryotic type
Methyltransferases
PZB74_12275 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
MMR_HSR1_Xtn
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
Ras
Arf
Roc
ABC_ATPase
Guanylate_kin
AAA_23
ABC_tran
AAA_29
AAA_15
Motif
Other DBs
NCBI-ProteinID:
WKN29742
LinkDB
All DBs
Position
3007872..3009245
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AA seq
457 aa
AA seq
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MQYASVEDTIVALSTPEGVGAIAVIRLSGKDAIRIVNQVFHGKDLEAQASHTLHFGTIRE
GKEVLDEVVASIFKAPHSFTKENVVEVSCHGSPYIVRKLIQLFLKQGGRLAQAGEFTKRA
FMNGQFDLAQAEAVADLIASDSEASHKAALNQMRGGFSEEIKTLRAQLVHFASMIELELD
FVEEDVEFADRAQLEGLINEILRVINLLIDSFDLGNVIKNGVPTVIAGKPNAGKSTLLNA
LLNEEKAIVSDIPGTTRDFIEDEINIGGIGFRFIDTAGLRETTDKVEAIGVKRTYEKMRK
ASLIIYLFDLEHDNLQDIHRAINQLENQGIPFIKVGNKIDKAQPDLLDAVRKIEDIVFIS
AEKKDNLEGLKQKVMDFVDLDKFKTSGTIVTNVRHYQSLLQTREALQDVLNGLAQEVTHD
FLAQDIRHALHYLGEITGEITTDDLLGNIFSKFCIGK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacgctagtgtagaagatactatagtcgctctttctaccccagagggagttgga
gccatagccgtaattcgtttgtccggtaaagatgctatccgtatcgtcaatcaggttttt
catggtaaagatctggaagctcaggcaagccataccctccattttggtaccatccgcgaa
ggtaaggaggtgctagacgaagtagtagcttcaatatttaaagctcctcattcttttacc
aaagaaaatgtggtagaggtatcctgccacggctctccctacattgtgcgtaaattaatt
cagctttttctaaagcagggggggaggctagctcaggctggcgaatttaccaaacgtgct
ttcatgaatggccagtttgatctggcgcaggcagaggcagtagccgacctgatagcttca
gactcagaagcttctcataaggcagctcttaatcagatgcgtggtggcttttctgaagaa
attaaaacgttacgtgctcagttagtgcattttgcttctatgatagagctggagctggac
tttgtagaagaggacgtagagtttgctgaccgtgcacagttagaagggttgattaacgaa
atcctgagagttattaatttactaattgacagttttgatctgggtaatgttattaagaac
ggtgtgcctactgtaattgctggaaagcctaacgctggaaaatctaccttgctcaatgcc
ttacttaacgaagaaaaagctattgtttctgatataccgggtaccacccgcgattttata
gaggatgaaatcaatataggtggcataggcttccgctttattgatacagcagggctgcgc
gaaactacagataaggtagaagcaataggagtaaagcgcacttatgaaaagatgcggaaa
gcttcgctaattatctatctttttgatctggagcatgataatcttcaggatattcatcgg
gcaatcaaccagcttgaaaatcaggggattccattcattaaggtaggtaataaaatagat
aaggcgcagcctgatttgctagatgctgtaagaaagattgaagatatcgtttttatctct
gctgaaaagaaagacaatctggaaggattaaaacaaaaggtaatggacttcgtagacctt
gacaaatttaagaccagcgggaccatagttactaatgtaaggcactatcaaagccttctg
caaacccgggaagcacttcaagacgtgctcaacgggttggcacaagaagtcacgcacgat
tttcttgctcaggatatccgccatgcattacactaccttggggaaatcacaggggaaata
accactgacgacttgctaggcaatatatttagcaaattctgtattggaaagtag
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