Pseudomonas rhizophila: CRX69_03445
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Entry
CRX69_03445 CDS
T09779
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03410
Base excision repair
prhz03430
Mismatch repair
prhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CRX69_03445 (recJ)
03430 Mismatch repair
CRX69_03445 (recJ)
03440 Homologous recombination
CRX69_03445 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_03445 (recJ)
DNA repair and recombination proteins [BR:
prhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CRX69_03445 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CRX69_03445 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CRX69_03445 (recJ)
BRITE hierarchy
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AVU74290
LinkDB
All DBs
Position
761869..763578
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRQLPDTLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL
VVALEQRQRILIVGDFDADGATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALTREPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGLELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGRYASSPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVARRDHSRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTDDPALAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFDPQWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVPGFHIRDALSVVAAQHPTLISKYGG
HAMAAGLTLAQENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPMFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGIDRDIWPNPTVR
WVELAYKLDLNEFRGQETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatagaaccccgccagctacccgacaccctgccattcctcggtgacttgccaccc
ctgttgacgcgcctgtatgcggcccgtggcgtgcagtccgaggctgaactggacaagagc
ctggcgcgcttgattccttatcagcaactcaagggtatcgacgcggccgtggatctgttg
gtggtggcgctggagcagcgccagcgcatcctgatcgtcggcgacttcgatgccgacggg
gcgacagccagcacggtgggcatgttgggcctgcgtttgctcggtgcggcccatgtcgat
tatctggtacccaatcgcttcgagtatggctacggactgaccccggaaattgtcgaggtc
gccctgacccgtgagccgcagttgctgatcaccgtggacaacggcatttccagtgtcgaa
ggtgtggcagcggcgaaagcggcggggctcaaggtgctggttaccgaccaccatttgccg
ggcctcgaactgccggcggcggatgccatcgtcaacccgaaccagccgggctgtgagttc
ccgagcaaggcattggccggtgtcggtgtgatcttttatgtgctgatggccttgcgggcg
cgtctgcgcagcctgggccggtatgccagcagcccccagccaaacatcggcgaactgctg
gatctggtggcactgggcagcgtggcggatgtggtgcctctggacgccaacaaccggatc
ctggtgcatcagggcctggaacgcattcgtgcagggcgcgcccgacccggcatcaaggcg
atcctggaagtggctaggcgcgatcattctcgtatcacttccacggacctcgggtttatc
ctcggcccgcgcctgaacgcagccgggcgtctggacgacatgagcctgggcatcgaatgc
ctgctcactgacgatccggccttggcgagggagatggcggcgcaactggacggcatgaac
caggatcgcaaatccatcgaacagggcatgcagcgtgaagcgctggcccagctcaaggac
ttgccgctggagtccatgccgttcggtttatgtctgttcgatcctcagtggcaccagggc
gttatcgggatcctcgcctcgcggatgaaggagcggtatttccgcccaaccattgctttt
gccgatgccggagacggcctgctcaagggctcggggcgctcggtgccgggttttcatatt
cgtgatgccctgagtgtggtggcggcgcaacatccaacgctgatcagcaagtatggcggc
cacgccatggcggcgggcctgacgttggcgcaagagaattttccactgttcgccgaggcg
ttcgacgctgaagtgcgccgccaattgcgcgaagaagacctgaccggacgcctgttgtcg
gacggcaccctggcggtggaagagttccacctggagctggctcgggcgctgcgtcacgcc
gggccctgggggcagcatttcccagagccgatgtttcacggtgtgttccagttggtcgaa
cagcgcgtggtgggcgaacggcacctcaaggtcgtcctcaaaagcgaatgcggctcggtg
aaactggacggtatcgccttcggcatcgaccgcgatatctggccaaaccccaccgtgcgc
tgggtggaactggcctacaaactcgacctcaacgagtttcgcggccaggaaacggtgcag
ttgatgattgcccatatcgaaccgcggtag
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