Pseudomonas rhizophila: CRX69_21475
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Entry
CRX69_21475 CDS
T09779
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
prhz
Pseudomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prhz03000
]
CRX69_21475
Transcription factors [BR:
prhz03000
]
Prokaryotic type
Helix-turn-helix
Other families
CRX69_21475
BRITE hierarchy
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_5
AAA_2
MCM
Mg_chelatase
AAA
PAS_4
PAS_8
HTH_50
Cons_hypoth95
PAS_7
AAA_16
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AVU77618
LinkDB
All DBs
Position
complement(4711113..4713104)
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AA seq
663 aa
AA seq
DB search
MNQQPAALSAEDRDYLTALGPASLNEGPSTALDEAWRACLQGVIARPAGIRRVIWESWLR
SVHAGLDPEDGAYRFVAPDDLAATLAANRVLIAAAAQVMRGLLAYNPKGHINLTDTQGTT
LYFCGLDLTPIGSRLLESVQGTNCTGLAIVEDRLVYVLAEENFGLGLRQRRMHCAAAPIR
DAQGRTLGMLTLTAEPGWFHFHTLGTVQAAAEAVSRQMALQTLLEEQQTVLEVLNEGLVV
LDEQGCIKALNHYARQLFRVGHDLLGSPFKSLGQSELTDAVLLASGEGVRDLDCTFELHD
RSHLACLVSVCPLEQGGRIVSLRENRRIREITRRIMGTQASYTFETILGHSRAIQDAVHL
ARIASRSDSTTLILGESGTGKELFAQAIHNASDRCRGPFVAVNCGAIPRDLVQSELFGHV
EGAFTGSARGGSAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEVTRVGAKKSLRV
NVRIIAATHRNLSQAVAEGAFREDLYYRLNVLNLTVPPLRMRREDVPLLARHFLARCARS
LRKSTQDLSPVALDMLGAYDWPGNVRELENVIERATNLAMSELIQPSDLALEIRQRGRLS
TWASVPEPRTAPDLGTHEMNAIIAALTDTRGNIRLAAQRLNVSRGGLYNKMSRYGLKVDA
FRS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaacctgccgccttgagcgccgaagaccgcgattacctcaccgcgcttggc
ccggcgtcattgaacgaagggcccagcactgcgctggatgaggcctggcgagcgtgcttg
cagggggtaatcgctcgccctgccggaatcaggcgggtgatttgggagtcctggttgcgc
agcgtccatgccggccttgatccggaagacggtgcgtaccgttttgtcgcgcccgacgac
ctcgccgcgacactggcagccaaccgggtgctgatcgccgcagcggcgcaggtcatgcgc
ggtttgctcgcctacaaccccaagggccatatcaatctgaccgatacccaaggcacgact
ctgtacttttgtggcctggatctcacccccataggcagtcgcctgctggagtcggtacag
ggcaccaattgcaccgggctggcgatcgtcgaagaccgtttggtctatgtgctggccgag
gagaacttcgggcttggcctgcgccagcgccgcatgcattgcgccgccgcgcctatccgg
gatgcccagggccgaaccttgggtatgttgaccttgacggcagaaccaggctggtttcac
ttccatacgctgggcaccgtccaggccgcggccgaggcggtctcgaggcagatggcgctg
caaaccttgctggaagagcaacaaaccgtgcttgaagtgctcaacgagggcttggtggta
ttggatgagcagggctgcatcaaggcgctcaaccattacgctcgtcagttgttccgagtg
ggccatgacctgctcggcagtccgttcaagagcctgggacaaagtgagctgaccgatgcc
gtcctgcttgccagcggggagggcgtacgggacctggactgcacctttgaactgcacgac
cgtagccatctggcatgcctggtgtcggtctgcccgctggaacaaggcgggcggattgtt
tcgttgcgcgaaaaccgacgcattcgggaaatcacccggcggatcatgggcacccaggcc
agctacaccttcgaaaccatcctgggccattcacgggcgattcaggatgcagtgcacctg
gcacggattgccagtcgcagtgattcgaccacgctgatcctcggcgagagcggcacaggc
aaggagctgttcgctcaggcgatccataatgccagcgaccgttgtcgcggtcctttcgtg
gcggtcaattgcggcgccattccccgtgacctagtgcagagcgaactgttcggtcatgtc
gaaggcgctttcaccggatcggctcgcggtggctcggcaggcaagttcgaattggccgat
ggcgggacgatcttcctcgacgaaatcggtgacatgtcctttgatgcccaggtcagcttg
ctgcgcgtcctgcaggaaggcgaggtgacacgggtgggggcaaaaaaatcgttgcgggtc
aacgttcgcatcattgccgccactcaccgcaacctgagccaggcggtggccgagggcgcc
tttcgtgaggacctttactaccggctcaacgtcctgaacctgaccgtgccgccactgcgg
atgcgccgcgaagacgtgccgttgctggcgcggcattttctcgcgcgttgtgcccggtcg
ctccgcaaatcgacgcaggacctttctcccgtggcactggatatgcttggcgcctacgat
tggccgggcaatgttcgcgagctggaaaacgtcattgagcgggcgaccaacctggcgatg
agcgaactgatccagccgagcgatcttgcgctggagatcaggcagcgagggcgactatcg
acgtgggcgagcgtccctgaacctcggacggcgccggaccttggcacccatgaaatgaat
gcaatcattgccgccctcacagacacgcgcggaaacatccgcctggcggctcaacggctg
aatgtgtcgcgtggggggttgtacaacaagatgagtcggtatgggctcaaggttgatgcg
tttcgttcttag
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