Pedobacter riviphilus: H9N25_18625
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Entry
H9N25_18625 CDS
T08657
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00521
Streptomycin biosynthesis
prk00523
Polyketide sugar unit biosynthesis
prk00541
O-Antigen nucleotide sugar biosynthesis
prk01100
Metabolic pathways
prk01110
Biosynthesis of secondary metabolites
prk01250
Biosynthesis of nucleotide sugars
Module
prk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
H9N25_18625 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H9N25_18625 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H9N25_18625 (rfbC)
Enzymes [BR:
prk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
H9N25_18625 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QNR83922
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Position
complement(4543657..4544205)
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AA seq
182 aa
AA seq
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MEIEQTGLKDCLIIKPRVFEDPRGYFFESFNQNTFEEKTGLSGRFVQDNQSYSSYGVIRG
LHAQTGEFAQAKLVRVTKGEVLDVAVDVRPSSPTYGKHIAVRLSAENKLQLYIPRGFVHG
FSVLSETAEFLYKCDNFFNKASETGVIYNDADLNIDWLIPEEDQAISDKDLLLKPFSVLQ
HI
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaacaaacaggattaaaagactgcctgattataaagccaagagtgtttgaa
gatcccagaggttatttttttgaaagttttaatcaaaatacctttgaagaaaaaacaggt
ttatccggcaggtttgttcaggataaccagtcttattcttcatatggtgtaatccgtggc
ctacatgcccaaaccggtgaatttgcacaggccaaattggtccgtgtaaccaagggtgag
gtattggatgttgcggtagatgttcgcccaagttcaccaacttatggtaaacacattgcc
gtacgcctaagtgctgagaataaactgcaattatacatccctagaggctttgtacatggc
ttttcggtattgagcgaaaccgcagaattcttatacaaatgtgataattttttcaataaa
gcttcagaaactggcgtaatttataatgatgcggacctgaacatcgattggttaattcca
gaagaagatcaagctatttcagataaagaccttcttttaaaacccttttcagttttacag
cacatatga
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