Phodopus roborovskii (desert hamster): 127221608
Help
Entry
127221608 CDS
T08852
Symbol
Rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127221608 (Rpap1)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127221608 (Rpap1)
BRITE hierarchy
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
127221608
NCBI-ProteinID:
XP_051039621
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MMLSRPKPGESEVDLLRFQSQFLEAGAAPAVQLVKGSRRFGDAHPDQLPRQDRRDVVMLD
DLPDLPPALVPAPTKRARPSPGHPLPHDEDPEERLSRHDQHITAVLSKIIERDTSSVPVT
LPVPSGVAFPPVFHRSQVRQGKTAASGKRSIFAQEIAAKRMTENRVSAAGGVVPSIDPPE
GAVPSETPSSRDKGSQFPEGIHDFHRSNLVTGKGLSSQASEQEVQTIHEENVARLQAMDP
REILKEQQQLLAQLDPSLVAFLRSHNHAMEQAGTKATKEHSPGRPIVPVTTEESILSTSP
SEPRMEDKLEPRVPALKLPVTPHKEWLHMETVELEKLRWTQDLPPPRRQQTQERMQARFS
LQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRVLALHVLSQIISR
AQAGEFGDRLEGSILRLLLDAGFLFLLRFSLDDRVDGVIAAAVRALRTLLVTPGDEELLD
STFSWYHGALVFPLMPSQEDKDDEGEDEEPTTGKAKKTPEEESRPPPDLARHDVIKGLLT
TNLLPRLRYILEVTCPGPSVVLDILAVLIRLARHSLESATRVLECPRLIETIVQEFLPTS
WSPMPVGPTSSLYKVPCAAAMKLFRVLASAGRNIAARLLSSFDFRSRLCRFIAEAPQELA
LPPEEAEMLSTEAFRLWAVVASYGQGSDLYRELYPVLMRALQTLPTELSTCPPQPLSMQR
MASLLTLLTQLTLAASSTHPEPTSGSAEACVSAIPSSITWTQVSGLQPLVEPCLKQILKL
LPRPDVWSALGPVPSACLLFLGAYYQAWSQQSGSCPEDWLQDMERLLDEFLLPLLSHPSL
GHLWDSLRHCSPLCNPLSCAPAPEAVPSLVSLGCAGGCPPLSVAGSASPFPFLTALLSLL
NILVRTHKGLCGQLAAVLAAPGLQNYFLQCVAPVPAPQLTPFSAWALRHEYHLQYLVLSL
TQKAATLKPELVANTALHHAMALVLLSRLLPGSEYLAQELLLSCVFRLEFLPENASGGPE
AADFSDGLSLGNTGDPQCRRGALLVQACHDLPSIRSCYLAQCSPARASLLTSQALYRGEL
LRVSSLLLPVPKEPLLPTDWPFQPLIHLYHRASDTPSGLPAADTVGVAVRALQWVLVLES
WRPEALSAVPPAARLARLMCVFLVDSELFRESPVQHLVAALLARLCRPQVLPSLNLDCPL
PGLASFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTFRLALFGEHVGVLRALGL
PLTQLPVPLDCYTEPAEDNLPLLQLYFRALVTGALRPHWCPVLYTVAVAHVNSFIFSQDP
KTSDEVKAARKNMLQKTWLLAEEGLRQHLLHYKLPNSSLPEGFELYSQLPRLRQQYLQTL
PTEVLQNGGFKT
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtccagaccaaagcctggagagtctgaggtggacctcctgcgcttccagagt
cagttcctcgaggctggtgcggcacccgcagtgcagctggtgaaaggaagtcggagattt
ggtgatgctcatccagaccagcttccacggcaggaccgtcgggatgtggtgatgctggac
gatctcccagatttgcccccagctctggtgcctgctcctacaaagagagccagacccagc
cctggccaccccctgcctcatgatgaagatcctgaagagagactgagcaggcatgaccag
cacatcaccgccgtcttgtctaaaattattgaacgagatacaagttcagtccctgtgact
ctgcctgtgcccagtggtgttgctttccctcctgtgttccatcgctcacaggtgagacag
gggaaaacggcagcatccggtaagaggagcatctttgcccaagagattgcagcaaagagg
atgactgaaaacagggtctcagcagctgggggagttgtccccagcatagacccaccagag
ggtgctgtgccctctgagactccctcctctagggacaaaggcagccagtttccagagggc
atccatgacttccacagatcaaatctggtcacagggaaggggctgagcagccaggcgtct
gagcaggaagtccagaccatccacgaagagaatgtagcaagactgcaagccatggatccc
agggagatcctgaaggagcaacagcagttactggctcaacttgaccccagcttggttgcc
ttcttgagatctcataaccatgccatggagcaagcaggaacaaaggccaccaaggagcat
agcccaggaagacccatcgttcctgtcaccacagaagagtccatcttgtcaacttctccc
agcgagcccaggatggaggataagctggagccgagagtcccagcactgaaactgcctgtg
accccccacaaagaatggctccatatggaaactgttgagctggagaagctccgctggacc
caggacctgcccccgccccggcgacagcaaacacaggagagaatgcaggcccgattcagc
cttcaaggagagctgctggcgcccgacgtggatctgcccacccatctgggcctgcaccac
catggagaagaggcagagagagcagggtactctctacaggagctgttccatctgacccgt
agccaggtgtcccaacagagagtgctagcattgcatgtattgtcccagatcatcagccgg
gcccaggctggtgagtttggagaccgcctagagggcagtatcttgcgcctcctcttggat
gctggtttcctcttcctgctgcgcttctctctggatgacagggtggatggtgtcattgca
gcagctgtccgggctcttcgtactctgctagtaactcctggagatgaggagctccttgac
agcaccttctcttggtatcatggagctttggtgttccctctgatgcccagtcaggaggac
aaagatgatgaaggtgaggatgaagaacctacaactggaaaggcaaagaagacccctgag
gaagaaagccgtcctccacccgacctggccagacatgatgtcatcaaggggctcctgact
accaatctgctgcctcggctgcgctatatactggaggtgacctgcccaggaccctctgtg
gttcttgacatcctagctgtgcttatccgcctggcccgacattccctggagtcagccacg
agggtcctggagtgtcctcggctaatagagaccatagttcaagagttcctgcctaccagt
tggtcccccatgccggtggggcctacttccagtctatataaagtgccctgtgccgctgcc
atgaaactgtttagagtactggcttcagctgggaggaatattgctgcccgactgttgagc
agctttgacttcaggagccgtctgtgccgattcatcgctgaagctccacaggaactggcc
ttgccacctgaggaagcggaaatgctgagcacagaggccttccgtctgtgggctgtggtt
gcttcctatggccagggcagtgacctttacagggagctgtacccagtgctcatgcgggcc
ttgcagaccctgcctacagagctcagcacctgtcccccacagccactgtccatgcagcgg
atggcctctctactcactcttcttacccagctgaccctggcagctagcagcacacatcct
gagcccaccagtggctctgctgaggcctgtgtgtcggccatcccttcttcaatcacctgg
acacaggtatctggacttcagccactggttgagccatgtctaaagcagatcctaaagttg
ctgcccagacctgatgtgtggagtgccctgggcccagtgcccagtgcctgcctgctgttc
ctgggtgcctactatcaggcctggagccagcagtcaggctcgtgcccagaggattggctt
caggacatggagcgcttgttggatgagttcttgctgccattgcttagtcatccttctctg
ggccatctgtgggattccttgaggcactgctccccgctctgcaatccgctgtcctgtgct
cctgctcctgaagctgtccccagccttgtgtcactgggctgtgcaggaggctgtccccct
ctcagtgtggctggctcagcctcacccttcccattcctcactgccctcctctctctcctc
aacattctggtccggacccacaaggggctttgtggacagctggctgctgtgttagctgct
ccagggctccagaactactttcttcagtgtgtggcccccgtgcctgccccacagctcaca
cctttctctgcctgggccctgcgccatgagtaccacctgcagtacctggtgctctcccta
acccagaaagcggcaaccctgaaaccagagctagtcgccaacactgccctccatcatgcc
atggccttggtcctgctgagccggctgctgcctggaagtgaatacctcgctcaagagctg
ctgctgagctgtgtgttccggctggagttcctgccggaaaatgcatcagggggtccagag
gcagctgacttctctgatggactgtccttagggaacactggggatcctcaatgcagacga
ggagcactcctagttcaggcttgccacgatctccccagcatccgcagctgctacctggct
caatgttcaccagcccgagccagcctgctgacttcccaagccttataccgtggggagctg
ctgcgagtctcaagcctgctactgcccgttcctaaggagccactgctgcccactgactgg
cccttccagccactgatacatctctaccatcgggcttcagatactccctctgggcttcct
gccgctgacactgtaggcgtcgctgtgagggccctacagtgggtgctagttctggagagc
tggcgccctgaggccctctcggctgtgcctcctgccgcccgcctggcaaggctcatgtgt
gtgttcctggtggacagtgagctattccgagagagtcctgtacagcatctggtggcggct
cttttggcacggctctgtcgaccccaagtcctgccaagcctcaacctggactgcccactc
cctggcctggcgtcttttcctgacctctatgccagcttcttagaccactttgaggctgtc
tcttttggggaccacttgtttggggccctggtcctccttcctctgcagcgacggttcagt
gtcaccttccgccttgccctctttggggagcacgtgggagtcttgcgagccctaggcctg
ccactgactcagctgcctgtgcccttggattgctacacagagcctgctgaagacaacctg
cctctccttcagctctacttccgggccctggttactggcgcactccgtccacattggtgc
cctgtcctctacactgttgccgtggctcatgtcaatagtttcatcttctcccaagaccca
aagacttcagatgaggtgaaggctgcccgaaagaatatgctgcagaaaacatggctgctg
gcagaggagggtcttcggcagcatctcctccactataagcttcccaactccagcctccca
gagggctttgagctgtattcccagttgcctcgcctgagacagcagtaccttcagacattg
cccacagaggtgctccagaatggaggattcaagacgtag
DBGET
integrated database retrieval system
