Phodopus roborovskii (desert hamster): 127224269
Help
Entry
127224269 CDS
T08852
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127224269 (Chd6)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127224269 (Chd6)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
127224269
NCBI-ProteinID:
XP_051043191
LinkDB
All DBs
Position
Unknown
AA seq
2713 aa
AA seq
DB search
MKIQKKEKQLAKLKALNHSPMSDASVHFDYKSPSSPFDCSTDQEEKIEDVANHCLPQKDL
YTTEEEADSFFSRKLISHNGMEDSGGRGTGVKKKRKKKDPGEQEGTKGSKDREPKPKRKR
EPKEPKEPRRAKEPKRAKEPKEAKQKDGVKKPRKPREASGIKEAKEKRSCTDYVSRTKSK
KASKEQGPTPVERKKKGKRKNETTVESLELEQSLPNPSLRSPEEPTESADSQKRRSGRQV
KRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKT
VQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIF
TEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAK
VKEFESLQILPEVKHVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWELITPSKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNAD
WLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELDV
LLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLSA
EQGVTDGTSDIPERGNIDKEDSAEDKLDGLQKQTASPRDGSDGIFGEKKDDSQAAQDGSN
PDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEVFRRSSEMDLI
NKEAQKRWTRREQADFYRTVSSFGVVYDQEKKAFDWTQFRIISRLDKKSDESLEHYFYSF
VAMCRNVCRLPTWKDDGPSDTSIYVEPITEERAAKTLYRIELLRKIREQVLRCPQLHERL
QLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTD
TQAPGSLCCLYQTNSKLYESLTYTQVSRTSESLESEPENLVKMESRDDPLCLPEGSLSDI
TCENFISKVQEVISIDHDESLLPESLESMMYGKTGLSREPRSFQETPSTNTQSRKDTVTI
SASRDESYQSAGTEAEMTSSSSLMSSLEAGVAKMNIKNGKHLLISISKEGEPCCSETGRR
PESMGHLEAKCLASPTLDTGHESGFVDLCSLSVCDSRRKLSSDQQLIDLLENKTLESQLI
LSQNQSDEEEEENDDETLGIVASTAEKPEGLHFTKPTANIPKGKNLCFHQDEAKKGSLEV
VSQTPEPQRAFPPSASRCHCKPMERWARGLGSEESEVEKHKAYQPELYRSKANNSTVEGG
AAVIPTEPFKLKHELLKEPWKESTEGGKSFPMYVPEGSDPKPEDMDFENKDDYEKDGTCH
SQDYPGKYSEEESKSSTSGMAGDPGEEAQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINR
LDNICHVVLKGKWPSSQQYEPSGALPTPILTSSAGSRNSLSEPEAAEHGFSNGAALAAQI
QKESFLAPVFTKDEQKHRRPYEFEVERDAKARSLEQYSATHGRPPIVLNGWHGESAIDLS
CSSEGSPGATSPFPVSTSTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRD
DAAMRRRRGRRKHIEGGMDLIFLKEQTLQAGILEVHEDAGQATLSTTHPEGPGAASPASE
PTAASSNQAETAVPSKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDINS
LSGEERVPAVPKEPGLRGFLPESKFNHTLAEPVLRDAGPRRRGRRPRNELLKAPAILTDS
PSGMGPLFMNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLPM
MLPGMAAVPQMFGVGGLLNTPMATTCTTTASASLSSTTKSGTSATEKTTEDKLSGRDGKA
DTLVEDKPGPGPFSDQSEPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQ
QGRHSEMVGLESQKRKKKKTKGDNPNPEPASRCEREPDCDQNCTESGTVLPPEREHVAQA
GEGGLKDSSDDTN
NT seq
8142 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacagaagaaagagaagcagctggccaagttaaaagctttgaatcactcccca
atgtccgatgcctctgttcattttgattacaaatcaccgtcatcaccatttgactgcagc
actgatcaggaagagaaaatcgaagatgttgccaatcactgtctgccccagaaagacctt
tatactactgaagaggaagctgattcctttttctctaggaaattgatatcccataatggg
atggaggatagtggaggcagaggtactggggtgaagaagaaacgaaagaaaaaggatcca
ggggagcaagagggaacaaagggaagcaaggacagggagcccaagccaaagaggaaacga
gaaccgaaagagccaaaagaacccaggagggccaaggagcccaagagggccaaggagccc
aaggaggcaaagcagaaagatggtgtgaagaagccccggaagccccgggaggcctctggt
atcaaggaggctaaagagaagaggagctgcacagactatgtatccaggacgaagtccaag
aaggccagcaaggaacaaggaccaaccccagtggagagaaagaagaaaggaaaaaggaaa
aacgaaaccactgtggagagtttggagctggagcagagtctgccgaacccatccctgcgg
agtcctgaggagcccactgagtctgcagacagccagaaacggcgctcgggacggcaagtg
aagcgcagaaaatacaatgaggatcttgacttcaaggtggtggatgatgatggggaaaca
attgctgttctgggagctggccgaacatctgcgctctcagcttctacactggcctggcag
gcagaggagcctccagaagacgatgcaaacatcattgagaagatcctggcatctaagact
gtccaggaggttcacccaggagaacctccatttgacctagagctgttctacgttaagtat
agaaatttttcctatttacattgtaaatgggccacaatggaagagctggagaaggatccc
cgcatcgcacagaagatcaaacgatttaggaacaaacaggcccagatgaagcacattttt
actgagcctgatgaagacttgttcaacccagactatatagaaattgatcgtatcttagag
gtggcccacaccaaggatgcagaaacaggggaggaagtaacacattacctggtgaagtgg
tgttccctgccatatgaagaaagcacatgggaattagaagaagatgtggatcctgcaaaa
gttaaagaatttgaatctctgcaaatcctccctgaagttaagcacgtggagcggcctgct
tctgatgcttggcagaagctggagacgtctcgtgagtataagaacagtaaccggctgcgg
gagtaccagctggaggggatgaactggcttcttttcaattggtacaacagaaaaaactgt
attttggcagatgaaatgggcctagggaaaaccatccagtccatcacattcctttcagaa
atattcgtcaggggaatccatggcccttttctcatcattgcccctctttctaccatcact
aactgggagcgagaattccggacatggacggagatgaatgctattgtgtaccatggcagc
cagatcagcaggcagatgattcagcaatatgaaatggtgtacagagatgcacagggaaac
cccctttcaggagtcttcaagttccatgtggtcattacaacatttgagatgatcctggca
gattgcccagagctgaagaagattcactggagctgtgtgatcatcgatgaggcccacagg
ttgaagaacaggaactgcaaacttcttgaggggctaaaactcatggccctggaacacaaa
gtgctgctcacaggaacacccttgcagaattctgtggaagagctcttcagtttgcttaac
tttctggagccttcgcagtttccttcagagactgctttcttagaggagttcggtgatctc
aaaacagaagaacaggtaaagaaattgcagtctatcctaaaaccaatgatgcttcggcgc
ctgaaagatgatgtggaaaagaaccttgctcccaagcaagagaccatcatcgaagtagaa
ctgaccaatatccagaaaaagtactaccgtgccatcctggagaaaaacttttccttcctg
accaaaggcgcaaatcagcacaacatgcctaatcttatcaatactatgatggagctgaga
aaatgctgtaaccacccctacctgatcaatggggcagaggaaaagattctggaagatttc
cggaaagcccacagctctgaggcctctgacttccagctgcaggccatgatccaggcagct
gggaagctggtgctgattgacaagctgctccccaagctgatcgcaggcggccacaaagta
ctcatcttctctcagatggtgcgctgtcttgacatcctggaagattatctcatccagagg
agatacacgtatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagccatc
gaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccagagcagga
ggcctggggatcaatctcacagctgctgatacctgcatcatatttgattctgactggaac
cctcaaaatgacttgcaggctcaggcccgatgtcatcgtataggccagagcaaagccgtg
aaggtgtaccgcctaatcactcgaaactcctatgagcgggaaatgtttgacaaggccagc
ctgaagttaggcctggacaaggctatccttcaggacatcaacaggaagggcagcaccaat
ggagtacagcaactctcaaaaatggaagtggaggacttgctccggaaaggtgcttatggg
gccttaatggatgaggaagatgaaggttccaagttctgtgaagaagacatagaccagatt
ctgcaaagaagaacccacaccatcactatccagtcggaggggaaaggatccacttttgcc
aaggctagttttgttgcttcaggcaatagaacagatatttccttggatgatcctaatttt
tggcagaaatgggctaaaatagctgaattagacactgaagcaaataatgaaaaggaaagc
ttagtgattgaccggccccgtgtgaggaagcagaccaaacactacaactcctttgaggaa
gacgagcttatggagttctcagagttagacagtgactcagatgaaaggcccacaagatct
aggcgcctcaatgacaaagccaggcgctacctccgtgccgagtgcttccgggtagagaag
aacctgctcatctttggctggggccggtggaaggacatcctgactcatggacgattcaag
tggcacctgaatgagaaagacatggaaatgatttgccgggccctgttggtgtactgtgtc
aagcattacaaaggagatgaaaagatcaagagttttatttgggaactaatcacaccttcc
aaagacggacaagctcagaccctccagaaccactcagggttgtctgccccagtccccaga
gggaggaagggaaaaaagacaaaaaaccagctcttgctcccagaactgaagaatgcagac
tggctagccacctgcaaccctgaggtggtcttacatgatgatggatacaagaaacacctc
aaacagcattgcaacaaggtgcttttgagagttcggatgctgtactacctaaaagctgaa
atactgggagaagctgctgataaagcatttgagggaactcctgctagggagctggatgtg
cttctgccggatattgactacgtggaaatcccagtggattggtgggatgctgaggctgat
aagtcccttctcattggcgtgttcaagcacggttatgagaggtacaatgccatgcgggct
gacccagcactctgcttcctagagaaagtcgggatgcctgatgagaaatccctgtctgca
gagcagggtgttacagatggaacctcagacattcctgaaagaggcaacatagataaagaa
gacagtgctgaggacaagttagatggtctccagaagcaaacggcgagccccagagatgga
agtgatggcatttttggtgaaaagaaggatgacagccaggcagcccaggatggctccaac
ccagacaaatcaccctggccagtttcatctgctctcactgctcgactccggcgtctggtc
actatttaccagcgctgcaatcgcaaggagctctgccgacctgaaatcctaggtccaggt
aatcaaggatactgggttcaggaggaggtgttcaggagatcttcagaaatggacctcatc
aacaaggaagcccaaaaaaggtggactagaagagagcaagccgacttctatagaacagtg
tcttcctttggtgttgtgtatgaccaagaaaagaaagcctttgactggacacagttccgc
atcatttcccgtttggacaagaagtcagatgagagcctggaacactatttttatagtttt
gtagccatgtgccggaatgtgtgtcgtcttcccacgtggaaagatgatggtccctctgac
accagcatctatgttgaacctatcactgaggagcgggcagcaaaaactctgtaccgcatt
gaactgttgaggaaaatccgtgagcaggtgctcaggtgtccacagctgcatgagcgcctc
cagctttgcaggcccagcctctacctcccagtctggtgggagtgtgggaaacatgatcga
gacctgctcatcggcactgccaaacatgggctcaaccgcactgactattacatcatgaac
gacccccagctatccttcctagatgcctatagaaactatgcacaacacaaaagaactgac
actcaggctcctggaagtctctgttgtctttaccagaccaattctaaactatatgaatct
cttacttatacccaagtgagtaggacttcagagtctttggaaagtgagccagagaatctg
gtgaaaatggaaagcagagatgatcctctctgtctgcctgagggcagtttatctgacata
acatgtgaaaattttatctccaaagttcaggaggtcatttctattgaccatgatgaaagc
ttgctgcctgagtccttggagagcatgatgtacggtaagacaggactgagccgagagcca
cgctcttttcaggaaaccccaagtaccaacacacagtccaggaaagatactgtcaccatc
tcagccagcagagatgaaagctaccagtctgctggcactgaggcagaaatgacttcaagc
tcctctctcatgagcagcttagaagcaggagtagctaaaatgaacattaaaaatggaaaa
catttgttgatatctatctcaaaagaaggggaaccctgctgcagtgagacaggacggaga
cctgaaagcatgggccacctagaggccaaatgcttagcttcccctacgttagacacagga
catgaaagtgggtttgtagatctatgcagccttagtgtctgtgactccagaagaaaactc
tcatcagatcagcaattgattgatttattagaaaacaagactttagaaagtcagttgatt
ttgagtcagaaccagagtgatgaggaagaggaagaaaatgatgatgaaaccttaggcata
gtagcaagcactgcagaaaagccagagggcttgcacttcaccaagcccactgcgaacatc
ccaaagggaaagaacctctgcttccaccaggatgaagccaagaaaggaagcctggaggta
gtaagccagactcctgaaccacagagagcctttcctccctccgccagtcggtgtcactgc
aaacccatggaaaggtgggcccgtggtctggggagtgaggagtctgaagtagagaaacac
aaggcttatcagccagagctgtacagaagcaaagccaataatagcacagtggaaggtggg
gctgctgttattccaacagagccgtttaagctgaagcatgagcttttaaaggaaccatgg
aaagaaagtacagaggggggaaagagtttccccatgtatgttcctgaaggaagtgatccc
aaaccagaggacatggattttgagaataaagatgattatgagaaagatggaacctgccat
agtcaagactacccagggaaatactctgaggaagagagtaagagttcgacatcaggcatg
gcaggagaccctggggaagaggcacaggaagtccgggctcccaccattgctcagctgctg
caggagaaaaccctctattccttctcagaatggccaaaggatcgtgtgataattaaccgc
ctagataatatttgccatgtggtgttaaaggggaagtggccctccagccaacagtatgag
ccctcgggtgcactgcccacgccaattttaaccagcagtgcaggttctcgaaacagcctc
tcagagccagaagcagcagaacatggcttcagcaatggtgcagcattggcagcccagatc
cagaaggagagcttcttagccccagtattcacaaaagatgaacaaaagcacagacgtccc
tatgagtttgaggtggaaagggatgccaaagctcgaagcctagaacaatactctgccacc
catgggcgtcctcccattgtcctcaatggctggcatggggaatcagctatagacctctcc
tgctcatcagaggggtccccaggagccacatcccctttcccagtgagcaccagcacccct
aagattggggctatcggttcacttcaaggagccctaggtatggacttgtctggaattctg
caagctggcctaatccacccagtaactggacagatcgtcaatggaagcctcaggagagat
gatgctgccatgagaagacggagagggagacgaaaacatattgaaggagggatggacctc
atctttttgaaggagcaaacacttcaggctggaattctggaagtccatgaagatgcaggg
caggctaccctgagcactacacatcctgaaggaccaggagctgcttccccagcttctgag
ccaactgcagcatccagtaaccaggctgagacagctgttcccagcaagagcctacttgac
tggctgcggcagcaggctgactactccttggatgtccctggctttggtgcaagtttttca
gacaaacccaagcagaggagaccacgctgtaaagaacctggaaaattagacatcaactct
ctgagtggagaagagagagttcctgctgtccccaaggagccaggactgagggggtttctc
ccagaaagcaaattcaatcacaccctagctgagcctgtgcttcgagatgcaggcccccgc
aggagggggaggcggcctcggaatgaactcctaaaagctccagccattttgacagactct
ccctctggaatgggaccgctgttcatgaatgggctgattgcagggatggacctggtagga
ctgcagaatgtgagaaatattccaggcattcctctcactgggctggtgggctttccagct
ggttttgctaccatgcctactggtgaagaggttaaaagcaccctgagcatgctgcccatg
atgctgccaggcatggctgcagtgccccagatgtttggtgttggtggtctcctcaacaca
cccatggcaaccacctgcacaaccactgcatcagcatctctctcaagcacaacaaaaagt
ggtacctcggccactgaaaaaactacagaggacaagctgagtggccgtgatggaaaagca
gacactctggttgaagataagcctggcccgggtccgttttccgatcagtctgaacccaca
ataactactagtagtcctgtggctttcaacccatttctcatcccaggggtgtctcctgga
ctcatctacccatccatgtttctttcccccggcatgggcatggctctgccagccatgcaa
cagggcagacactcagagatggttggccttgagagccagaagaggaaaaagaagaaaaca
aagggggataaccccaacccagagcctgcttccaggtgtgagagggagccagactgtgat
cagaactgcaccgagtccggtactgtgttgcctcccgaaagagaacatgtggcacaggcc
ggggaaggggggctcaaagactccagtgatgacaccaattag
DBGET
integrated database retrieval system
