Phodopus roborovskii (desert hamster): 127228314
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Entry
127228314 CDS
T08852
Symbol
Katnip
Name
(RefSeq) katanin-interacting protein isoform X1
KO
K22858
protein JBTS26
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
prob03037
]
127228314 (Katnip)
Cilium and associated proteins [BR:
prob03037
]
Other cilia and associated proteins
Other cilium assembly proteins
127228314 (Katnip)
BRITE hierarchy
Motif
Pfam:
DUF4457
Motif
Other DBs
NCBI-GeneID:
127228314
NCBI-ProteinID:
XP_051048865
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MAASVSSARGACAPRRRGPGPARLRTKIGGLGKAGQTPRAEGEVPGLHRDVTIPEGGLNE
RSSFDIGPEPRSNQGNCKHCQGRFRFGLPEPPPLGMDGQALRKVERSRPCSRERKEGYTK
DMVTDFDEKHDEYLILLQQRNRLLKHLKAKDPVQLRLEHLEQGFSVYVNGANSELKTSPR
KAVHADFSRSASQAEGSQDYGRRTLFREAEEVLRRSSRTAPGKVQRRGWHQKSVQIRTEA
GPRLHIEPPLDCSEDFELPKDVAGKAKDATVDHIQELRKGLGLSTDLQTQEDGSSDEYDS
IEEDVLSETETEDLVLPGHTSDDFPLPSQDTVQKDVPKDQELEGWPPQDTDTLVVMGFNP
ASKSNKMERVLSAKRKDNAEAFIPSKPESVLNPQAPTVFPDQERACSRPCSRRDRPLSAT
RKAYAAEDREEDASAVLKAIQVENAALQQVFLSQEPELPTSAQQDPEDPPTKSCPNLLKA
KEDSPELLAVTPVTTNPELCRAAGGANTSSQAMDRMGTLGSRQQQKLLGVLQTMESDTAH
LSQVAVPTEKPVLDPEEKWRSRVDEIEDAIYVTMEILSNWGNASWVGLTEVQFFDLNDIK
LYVSPHDVDIRNTVLPGELGCLVNRDLVSKKDPPVWTCPFYPPLQLYFIIHNMRQLHDFG
LAKIKVRNYWTADGDLDVGAKNVKVYVNKSLIFDGVLDKGGGKAPFDCIIPVDLQSQKNE
SLDKALSAGWEESKGALKMAGMNGDEEFGHSCSQPAEALVDMTVSSQGDFYGEKVNSTHC
RKDSLSKLQEDVRQLTAPASMGDGPSVPSSSSPGKCPPLEEEPSLIQQLENLKGKRIPEP
AGKTPHWLQPSLAGMDKKQAGRKPKPLWLSPEKDLEQKSRLPVDDVIGETPGEVEAREKG
PRREQGKTSSWNVITEDRPQRVSSKACGDDLDIFSQPPNRDRPASGRRALKKDASGSHGD
DQPASKEDAQVTGTLPWLQWYGEKEHALHASWDSLTAFDHAHRGRISALEPQGDILDEFL
KQQRSSRYEEPPTPHRQEEPEPSIETDDDSDFKIPVLPYGQHLVIDIKSTWGDRHYVGLN
GIEIFSSTGEPVQISSITADPPDINILPAYGKDPRVVSNLIDGVNRTQDDMHVWLAPFTP
GMTHSISIEFTHPCQVALIRIWNYNKSRIHSFRGVKDITMLLDTQCIFEGEIAKASGTLM
GAPEHFGDTILFTMDEDILEAIFCLDETFDMDAESLCGFQPEEALRRPSTADDGEGQDER
PFTQAGLAAQDQVPGLELQVSPPVSEVTTPEPGIFYGLCLRLNFTASWGDLHYIGLTGLE
VVGKDGQALPIHLHQLSASPRDLNDLPEYTDDSRTLDKLIDGMNITTEDEHMWLIPFSPG
LDHVVMIHFDRAQSIAGLRLWNYNKSPEDTYRGVKIAHVSLDGLCVSPAEGFLIRKGPGN
CHFDFAQEILFGDYMQTRLSPAPTRRLDSRSLERASMDYEAPLMPCGFIFQFQLLSSWGD
PYYIGLTGLELYDEHGERIPLSQNNIAAFPDSVNALEGVCGDVRTPDKLIDQVNDTSDGR
HMWLAPILPGLVNRVYVIFDLPTTVSMIKLWNYTKTPQRGVKEFGLLVDDLLVYNGILAM
VSHLVGGILPTCEPTVPHHTILFAEDTDFCHQEKHNFSKPEEDQDIQMMNENQVITTSRR
KPGTADPALRPKTCIREKETSRRWRC
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcagttagcagcgcccggggcgcctgcgcacctcgccgccgaggtccgggc
ccagcacgcctgcgcacaaagatcggcggccttgggaaggcgggccagacgccgagagca
gagggggaagtcccagggctccatcgtgacgtcacgatacccgaaggcgggctcaatgaa
cgaagctccttcgacattggtccggaacctcgtagtaaccaggggaactgcaaacattgt
cagggccgcttccggttcgggctcccggaaccgccgcctctagggatggacggtcaggcc
ctgcggaaggtggagagaagccggccctgctctcgggagagaaaggagggttatactaag
gacatggtgacagactttgatgagaaacatgatgagtatttaatattgcttcagcagaga
aaccggctgttaaagcatttgaaggccaaggatcctgtgcagctgaggctggagcatttg
gagcaaggtttctccgtctatgtcaatggggccaattcagagctgaagacctccccacgg
aaagctgtgcatgcagacttctccagaagtgcctcacaagctgaagggtcacaagattat
ggacgaagaaccctgttcagagaagccgaagaagtcttaagacgcagctcgaggacagca
ccggggaaggtccagcgccgaggatggcaccagaaatccgtgcagatcagaactgaagct
ggccctcggctccacattgaacctcctctggattgttcagaagattttgagttacctaag
gatgtggctggcaaggccaaggatgccactgtggaccatatacaggagctgagaaaaggt
ttgggactcagcacagacctccagacgcaggaggatggctccagtgatgagtacgactct
attgaggaagacgtcctctctgagactgagaccgaggacctcgtactgccaggccatacc
agcgatgatttccctcttcccagccaggacacagtgcagaaggatgtccccaaggaccag
gagctggaaggctggcctccccaggacacagacacccttgtggtgatggggtttaaccca
gcttctaaaagtaataaaatggagagggttttgtctgctaagcggaaggacaatgctgaa
gccttcatccccagcaaaccagagtcagtcctgaatccacaggcccccactgtgttcccg
gaccaggaaagggcctgctccagaccttgcagccggagagacagacccctgtcagcaact
cgcaaagcatatgcagcagaagaccgagaggaggatgcctcggctgtgctgaaagccatc
caggtggaaaatgcagctctgcaacaagtgttcctcagccaagagcctgagctacccacc
agtgcacagcaggatcctgaggatccaccaacaaaatcatgccccaatctgctgaaggcc
aaggaggacagcccagagctgcttgctgtcactccagtgaccaccaatcctgagctgtgc
cgggcagcagggggagccaataccagcagccaagccatggacagaatgggcactttggga
agcagacaacagcagaagcttctgggtgtcctgcagaccatggaaagtgacactgcccat
ctcagccaggtggctgtgccaacagagaagccagtactagacccagaggaaaagtggaga
tcgagagtagatgagattgaagatgccatctatgtgaccatggaaatcttgtctaactgg
ggcaatgcatcatgggtgggtctcacggaagtccagttctttgacctgaacgacataaag
ctgtatgtctcacctcatgatgtggatatccggaacacagtgttgccaggagagctgggc
tgccttgtcaacagggacttagtgagcaagaaggacccccctgtgtggacctgccccttt
taccctccacttcagctctattttattattcacaacatgcgacagcttcatgacttcgga
ctggccaagatcaaggttcggaattactggacagcagatggggatcttgatgttggtgcc
aagaacgtgaaagtctatgtcaacaaaagcctcatctttgatggcgtgttagataaagga
ggaggcaaagccccttttgattgtatcatccctgttgaccttcagagccagaagaatgag
agcctagacaaggccctgagtgctggctgggaagaaagcaaaggtgcccttaagatggct
ggcatgaatggggatgaggagtttgggcacagctgctcacagccagctgaagccttggtg
gatatgacagtttcctcacaaggagatttctatggtgaaaaggtgaattctactcattgc
cgaaaggacagtttgtccaagttacaggaagatgtaagacaattgacagcccctgcctca
atgggtgatggacccagtgtcccttcttcttcctcccctgggaaatgtcctcctctagaa
gaggaaccctctttgatccaacagctggaaaacctcaaaggcaagagaatcccagaacct
gctgggaaaaccccacactggttacagccttctctagcagggatggacaagaaacaggca
ggcaggaagcccaaacccctgtggctcagtcctgaaaaggatctggaacagaagagcagg
cttccagtagatgatgtcattggtgaaactcctggagaggtagaggccagggaaaaaggc
cctcggcgtgagcaagggaagactagcagctggaatgtcatcactgaagatagaccccag
agggtgtcctccaaagcctgtggcgatgacttagacatcttcagccagcctcctaacagg
gatcggcctgctagtgggaggagggccctgaagaaggatgcaagtggtagccatggtgat
gaccagccagccagcaaagaagatgcccaggtcactgggacactgccttggttgcagtgg
tacggtgagaaggaacatgcactgcatgcatcatgggactccctcacagcctttgaccat
gcccaccggggccgcatctctgccctggagccacagggggacatcttagatgagttcctg
aagcagcagaggagcagccggtatgaggaacccccaactcctcacagacaggaggagccg
gagccctccatagagacagatgatgacagtgactttaaaatcccagtcctcccttatgga
cagcacttggtcatcgacatcaagtctacatggggagacagacactatgttggccttaat
ggcatagagatattcagctccacaggggagccagtgcagatctccagcattacagcagac
ccccctgacatcaacattttaccagcttacgggaaagacccacgtgtagtctccaacctc
attgacggggtgaacaggacccaagatgacatgcacgtctggctggcccccttcacacca
ggcatgactcactccatctccatcgagttcacacacccttgccaagttgccctgattagg
atttggaattacaataagtctcgaatacattccttccgtggtgtgaaggacatcaccatg
ctgttggatacacagtgcatctttgaaggagaaattgccaaagcctcgggaaccctgatg
ggagcccctgagcactttggagacactatccttttcaccatggatgaggacatcctggag
gccatattttgcttggatgagacttttgacatggatgctgagagcctgtgtggctttcag
cctgaagaggcactaaggaggcctagcactgctgacgatggtgaaggtcaggatgagcgg
cctttcacacaggccggcttggctgcccaagaccaggtaccagggctagagctacaagtc
agtcctcctgtctctgaagtcaccacaccagagccaggcatcttctacgggctgtgtctg
cgactaaacttcacagcctcctggggtgacttgcactacatagggctcactggcctggaa
gtagtgggcaaggatggccaagccctgcccatccaccttcaccagctctctgcctctccc
agggacttaaatgacctgcctgagtacacagatgactctcggaccctagacaagttaatc
gatggcatgaacatcaccaccgaggatgagcacatgtggctgatccccttttcccctggg
ttggaccatgtagttatgatccactttgacagagcccaaagcattgctggcctgcgcctc
tggaactacaataaatctcccgaggacacctaccgaggggtcaaaatcgcccatgtgtcc
ctggacggcctgtgtgtgtctcctgcagaaggctttcttatccgaaagggacctggaaac
tgtcactttgattttgcacaagaaatcctctttggggactacatgcagacccgactgtca
ccagcacccaccaggagactggattcaaggagcctggagcgcgccagcatggactacgag
gccccactcatgccctgtggcttcattttccagttccagctgctgtccagctggggtgat
ccctactacatcggcctcacagggctggaactgtatgatgagcatggggagaggatccca
ttgtcccagaacaacattgctgccttcccggacagtgtgaacgcgctggagggtgtatgc
ggggatgtgcgaacccctgacaagcttatcgaccaagtcaacgacaccagtgatggcagg
cacatgtggctggcccccatcctgcctggcctggtgaaccgggtatatgtcattttcgat
ctgcccaccactgtgtcaatgatcaaactgtggaattacacgaaaacacctcagcgaggg
gtgaaggagtttggcctgctggtggatgacttgctggtgtacaatggcattcttgccatg
gtgagccacctggttgggggcatcctgcccacatgtgagcctaccgtgccccaccacacc
atcctctttgccgaggatactgacttctgtcaccaggagaaacacaacttcagtaagcca
gaggaagaccaggacatacagatgatgaatgaaaaccaggtcatcactacctcaaggagg
aagccaggcactgctgacccagccttacgccccaaaacctgcattcgtgaaaaggagacc
tcaaggcgttggcgatgctga
DBGET
integrated database retrieval system
