Phodopus roborovskii (desert hamster): 127234924
Help
Entry
127234924 CDS
T08852
Symbol
Thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127234924 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
127234924 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127234924 (Thoc1)
03041 Spliceosome [BR:
prob03041
]
127234924 (Thoc1)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127234924 (Thoc1)
Spliceosome [BR:
prob03041
]
Complex C
Other components
EJC/TREX
127234924 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127234924 (Thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
HsdM_N
Motif
Other DBs
NCBI-GeneID:
127234924
NCBI-ProteinID:
XP_051057967
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MSPTPALFSLPEARTRFTKSTREALNNRNIKPLLNAFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSACENVLAIISLAIGGVTESVCTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
STWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASSDTKPTRVVRKRAAP
EDFLGKGPNKKILIGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENM
VESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEE
IKTGEDEDEEDNDALLKENESPDVRRDKPITGEQIELFANKLGEQWKILAPYLEIKDSEI
RQIECDSEDTKMRAKQLLVAWHDQEGAHATADNLISALNKSGLSDLAESLTNDTETNS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccggcgcttttcagtttgcccgaggcgcggacgcggtttacgaaatct
accagagaggccttgaataacagaaatatcaagccattgttgaacgccttcagtcagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcggcatgtgagaacgttttagctattatttctcttgctatt
gggggagtaactgaaagtgtctgtaccgcatccacgccatttgtgctgttgggagatgtc
ttggactgccttcctttggaccagtgtgacacaatattcacttttgtcgagaagaacgtt
tctacttggaagtcaaatacattctattctgctggcaaaaattatttactacgtatgtgc
aatgatctcctcagaagattgtctaaatctcagaacacggtcttctgtggacgaattcaa
ctctttttggccaggctttttcctctatcagagaaatcaggtcttaacttacagagtcag
tttaacctggaaaacgttactgttttcaatacaaatgagcaggaaagcaccctaggtcag
aagcacactgaagatagagaggaagggatggatgtagaagaaggtgaaatgggagatgat
gaagccccaacaacttgctctattccaattgattacaacctatatagaaaattttggtca
cttcaggattacttcaggaacccagtacaatgctatgagaagatttcttggaaaactttt
ctcaagtattctgaagaagttttagctgtttttaagagttataaattagatgatactcaa
gcctccaggaaaaagatggaagaattaaaaacaggaggagaacatgtatactttgcaaag
tttttaacaagtgaaaagttgatggatttacagctgagtgatagtaactttcggcgacac
atcctgttgcagtatctcattttatttcaatatctcaagggacaggttaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactttggattgaagatactacaaaatcagtc
taccaactgctatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagagaattggaactcgtggaaaaatgaaggctgcccaagttttgtg
aaggaaagagcatcatcagacaccaagcccacaagagtggtacggaagagagcagcccca
gaagacttcttaggcaaagggcccaacaagaaaatcttgattggaaatgaggagctaaca
aggctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagagaatac
atgccaactttggaggagttctttgaagaagccattgaacaagcagatcctgaaaacatg
gttgaaagtgaatataaagctgtgaacaattcaaattatgggtggagagctctcagactc
ttagcacgaagaagccctcacttcttccagccaaccaatcagcagtttaagagtctgcca
gagtacctggagaacatggtaataaagctagccaaggaactaccacctccttctgaagaa
ataaaaacaggtgaagatgaagatgaggaagataatgatgctttactgaaggaaaatgaa
agcccagatgtccggcgagataaacctataacaggggaacagatagagttatttgccaac
aaacttggtgagcaatggaagattttggctccttacttggagattaaagactctgaaatt
aggcagattgagtgtgacagtgaagacacgaagatgagggccaagcagctccttgttgcc
tggcacgatcaagaaggagctcatgcaacggcggacaacctcatcagcgcactaaacaag
tctggattaagtgaccttgcagaaagcctaactaatgacaccgagacaaatagttag
DBGET
integrated database retrieval system
