Phodopus roborovskii (desert hamster): 127235141
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Entry
127235141 CDS
T08852
Symbol
Scn10a
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prob04040
]
127235141 (Scn10a)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127235141 (Scn10a)
BRITE hierarchy
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
GPHH
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
127235141
NCBI-ProteinID:
XP_051058303
LinkDB
All DBs
Position
Unknown
AA seq
1951 aa
AA seq
DB search
MEFPFGSVGTTNFRRFTPESLAEIEKQIAAHRAAKKAKAKHGEQKNQDEKPRPQLDLKAC
NQLPRFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATWALWLFSPFNLVR
RTAIKVSVHSWFSIFITVTILFNCVCMTQSDLPEKIEYAFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCIRNGTDPHKAHNFSSEMTENYYIK
DGTTDPLLCGNGSDAGHCPSGYVCLKTSGNPDFDYTSFDSFAWAFLSLFRLMTQDSWERL
YQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKKFQEA
LEMLQKEQEVLAALGIDTASLHSHNGSPLAPKNTNERKHRMKSRVSEGSTDDNRSPQSEP
YNQRRMSFLGLSSGRRRASHGSVFHFRAPSQEVTFPDGITDDGVFHGDHESHRGSLLLGR
GAGQAGPLPRSPLSQSPNPGHGEEGQLTVPAGAPEGLALEAAGQKKNFLSAEYLNEPFRA
QRAMSVVSIMTSVIEELEDSKLRCPPCLISLAQKYLIWECCPKWMKFKMVLFELVTDPFA
ELTITLCIVVNTIFMAMEHYPMTEAFDAMLQAGNIVFTVFFTMEMAFKIIAFDPYYYFQK
KWNVFDCVIVTVSLLELSISKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVGAL
GNLTFILAIIVFIFALVGKQLLGEAYGCRRDGVALWNGEQLRWHMCDFFHSFLVIFRILC
GEWIENMWVCMQVSEKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAPEDDGEV
NNLQVALARIQALGHRASQAISSYLSSHCRPRWPKVEAQLAVKPSLSNSKAENHITADAV
NNAGGSPAKPALGGPKEDYRDFIADANVWVSVPIAEGESDLDELEEDMERNSQSSWQEES
PKGQEQLPEAQSCGDHEACKSPGSGVSSEDLAPYLGEGWKCEATPQVPAEGVDDTSSSEG
STVDCPDPEEILRKIPELAEDLEEPDDCFTEGCTRRCPCCKVNTSKFPWATGWQLRKTCY
RIVEHSWFESFIIFMILLSSGALAFEDNYLEQKPRVKSMLEYTDRVFTFIFVFEMLLKWV
AYGFKKYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASLKALRTLRALRPLRALSRFEG
MRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSRCIDTSSNPFSVVNSTIV
NNRSECDHQNHTGHFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSREIDCQP
QWEDNLYMYLYFVVFIIFGGFFTLNLFVGVIIDNFNQQKRKLGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIAIMVLICLNMVTMMVETDDQSEEKTK
ILGRINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVILSIGSLIFSAILKSLESY
FSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM
ASFANVVEEAGIDDMFNFKTFGNSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNMSNNS
ASRGNCGSPAVGIVFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSEDDFDMFYE
IWEKFDPEATQFIAFSALSDFADTLSGPLRIPKPNQNILIQMDLPLVPGDKIHCLDILFA
FTKNVLGESGELDSLKTNMEEKFMATNLSKASYEPIATTLRWKQEDISATVIQKAYRNYV
LQRSLTLSNPLSVPRAEEDEMSLPGEGFVTFMANDISGIPDKSETASAISFPPSYDSVTR
GLSDRVNISTSSSMQNEDEATRKEGNSPRPQ
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccctttgggtccgtgggaactacgaacttccgacggttcactccggagtcg
ctggcagagatcgagaagcaaattgctgcccatcgtgcagccaagaaggccaaggctaag
cacggagagcagaagaaccaggatgagaagcccaggccgcagctagacttgaaagcctgc
aaccagcttcccaggttctatggtgagctccctgcagaacttgtcggggagcccctggag
gatctagacccattctacagcacacaccggacgttcatggtattgaataagggcaggacc
atttccagattcagtgctacttgggccctgtggctcttcagccccttcaacctggtcaga
agaacagccatcaaagtgtctgtccactcctggttctccatatttattaccgtcactatt
ctgttcaactgtgtgtgcatgacccaaagcgatcttccggagaaaatcgagtatgccttc
accgtcatctacaccttcgaagccctgataaagatactggctagagggttttgtctaaat
gagttcacttatctgcgagacccctggaactggctagacttcagcgtcatcactctggcg
tatgttggtgcagcgatagacctccgaggaatctcaggcctgcggacattccgagttctc
agagccctgaaaacggtttctgtgatcccgggactgaaggtcatcgtcggagccctgatc
cactcggtgagaaagctggctgacgtgaccatcctcactgtcttctgcctgagtgtcttt
gccttggtgggcctgcaactcttcaaggggaaccttaagaacaaatgcatcaggaatggc
acggatccccacaaggctcataatttctcctctgaaatgacagaaaattactacatcaag
gacggcactactgaccccttactgtgcggtaatggatctgatgctggccactgccccagt
ggctacgtctgcctgaaaacttctggaaaccctgattttgactacaccagcttcgactcc
tttgcgtgggcgttcctctcactgttccgtctcatgacgcaggactcctgggagcgcctg
taccagcagacactccgggcctctgggaaaatgtacatggtcttttttgtgcttgtcatc
ttcctcggatcgttctacctggtcaacctgatcttggctgtggtcaccatggcctatgag
gagcagaaccaagcaacaattgcagaaatcgaagccaaggaaaagaagttccaagaagcc
cttgaaatgctgcagaaggagcaggaggtgctggccgctctggggattgacacggcctca
ctccactcccacaatggatctcctttagcccccaaaaacacgaatgaaagaaagcacaga
atgaaatcaagggtgtcagagggctctacagatgataacaggtcaccccaatctgagcct
tacaaccaacgcaggatgtctttcctaggcctgtcttctgggagacgcagggctagccac
ggcagtgtgttccacttccgtgcgcccagccaggaggtcacctttcctgacgggatcaca
gatgatggagtctttcacggagaccatgaaagccatcggggctccctgttgctgggcagg
ggtgctggacaggcaggccctctccccaggagcccattgtctcagtctcccaaccctgga
catggggaagagggacagctcacagtacccgctggagctcccgaaggcctggcacttgag
gctgcggggcagaagaagaattttctgtctgcagagtacttgaatgaaccttttcgagca
cagagggcaatgagcgtggtcagtatcatgacatctgtcattgaggagcttgaagattct
aagctgaggtgcccgccctgcttgatcagcttggctcagaagtatctgatctgggagtgc
tgccccaagtggatgaagttcaagatggtcctcttcgagctggttacggaccccttcgca
gagctcaccatcaccctctgcatcgtggtgaacaccatcttcatggccatggagcactac
cccatgacagaagcctttgacgccatgctccaagccggcaacattgtcttcacggtgttt
tttacaatggagatggccttcaagatcattgccttcgacccctactactacttccagaag
aagtggaacgtctttgactgcgtcatcgtcaccgtgagcctgctggagctgagcatatcc
aagaagggcagcctgtctgtgcttcggaccttccgcttgcttcgggtcttcaagctggcc
aaatcctggcccaccctcaacacgctcatcaagatcattggcaattcggtgggggccctg
ggcaacctgaccttcatcctggccatcatcgtcttcatctttgccctggttgggaagcag
cttctcggggaggcctacggctgccgcagggatggcgtcgccctgtggaatggcgagcag
ctccgctggcacatgtgtgatttcttccactctttcctcgtcatcttccggatcctctgc
ggagagtggatcgagaacatgtgggtgtgcatgcaagtcagcgagaaatcaatctgcctc
atcctcttcctgactgtgatggtgctgggcaacctggtggtgctcaaccttttcatcgcc
ttgctgctgaattcctttagtgccgacaacctcacagccccggaggacgatggggaggtg
aacaacttgcaggtagcactggccaggattcaggcattgggccatcgggccagccaggcc
atttccagttacctcagcagccactgccggccccgctggcccaaggtggaggcccagcta
gcggtgaagccctccctcagcaactccaaagcagagaaccacatcactgctgatgctgtc
aacaatgcaggggggagcccagcaaagcccgctctcggtggccccaaggaggattacagg
gacttcatcgccgatgctaacgtgtgggtctctgtgcccattgccgagggagaatctgat
ctcgatgagctcgaggaagacatggagaggaattctcagagctcttggcaggaagagagc
cccaaagggcaggaacagctgccggaagcccaaagctgtggagaccatgaagcgtgtaag
agcccaggctctggggtgtcctcggaggacctggctccatacctgggtgagggatggaag
tgtgaggccacccctcaggtccctgctgagggagtagatgacacaagctcttctgagggc
agcacggtggactgcccggatccagaggaaatcctccggaagattccagagctggcagaa
gacctggaagagccagatgactgcttcacagaaggctgcacccgccgctgtccctgctgc
aaagtgaataccagtaagttcccctgggccacaggctggcagttgcgcaagacctgctac
cggatcgtggagcacagctggttcgagagcttcatcatcttcatgatcctgctcagcagc
ggagccctggcctttgaggacaactacctagaacaaaagccccgagtgaagtctatgctg
gagtacaccgatagagtgttcaccttcatcttcgtgttcgagatgctgctcaagtgggta
gcttatggcttcaagaagtatttcaccaacgcctggtgctggctggacttcctcattgtg
aacatctctctgacaagcctcatagcaaagatccttgaatactcagacgtggcatccctc
aaagctcttcgcactctccgcgccctccgaccactgcgggctctgtctcgatttgaaggc
atgagggtggtggtggacgcgctggtgggcgccatcccctccatcatgaacgtcctcctg
gtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctcttcgccgggaaa
ttttccaggtgcatcgacaccagcagtaatccgttttctgttgtgaattcgaccattgtg
aacaacagatcggagtgtgaccatcaaaaccatactggccacttcttctgggtcaacgtg
aaggtcaactttgacaatgttgctatgggttacctcgcacttctgcaggtggcaaccttc
aaaggctggatggacattatgtatgcagctgttgattcccgagagattgactgccagcct
cagtgggaggacaacttgtacatgtacctatacttcgtcgtcttcatcatttttggcggc
ttctttaccctgaatctcttcgttggggtcattatcgacaacttcaaccaacagaaaaga
aagctagggggccaggacatcttcatgacggaggaacagaagaagtactacaacgccatg
aagaagctgggctccaagaagccccagaagcccatcccgcggcccctgaataagtaccag
ggcttcgtgttcgacatcgtgaccaggcaagcttttgacatcgccatcatggtcctcatt
tgcctcaatatggtcaccatgatggtggagacagacgaccagagtgaggagaagacaaag
atcctgggcaggatcaaccagttcttcgtggccgtcttcacgggcgagtgcgtgatgaag
atgtttgccctacgccaatactacttcaccaatggctggaatgtgttcgacttcatcgtg
gtgatcctgtccattgggagtctcattttttctgcaatccttaagtcacttgaaagttac
ttctccccaacgctcttccgggtcatccgtctggccagaatcggccgcatcctcaggctg
atccgagcagccaaggggatccgcaccctgctcttcgccctcatgatgtccctgcccgcc
ctcttcaacatcggcctcctgctcttcctggtcatgttcatctactccatctttggcatg
gccagcttcgctaatgtcgtggaggaggctggcatcgacgacatgttcaacttcaaaacc
ttcggcaatagcatgctgtgccttttccagatcaccacgtcagccggctgggatggcctc
ctcagccccatcctcaacacggggcccccatactgtgaccccaatatgagcaacaatagt
gcttcccgagggaactgtgggagcccagcggtgggcatcgtcttcttcaccacctacatc
atcatctccttcctcatcgtggtcaacatgtacatcgccgtgattctggagaacttcaat
gtggccacagaagagagcacagagcccctgagcgaggacgacttcgacatgttctatgag
atctgggagaagttcgacccagaggccacgcagttcattgccttttctgccctctcggac
tttgcagacacactctctggccctcttagaatcccaaaacccaatcagaatatattgatc
cagatggacctgccattggtccctggagacaagatccactgtttggacatcctttttgcc
ttcacaaagaacgtcttgggagaatctggagagctggattctctgaagacgaacatggaa
gagaaattcatggcaactaatctttccaaagcatcctacgaaccaatagcaaccaccctc
cggtggaagcaggaagacatctcggccactgtcattcagaaggcctatcggaactatgtg
ttgcagcgctccttgacgctctccaaccccctgagtgtgcccagggctgaggaggatgaa
atgtcactccctggtgaaggctttgttacattcatggcaaacgacatcagtgggatccca
gacaaatcagaaactgcttctgccatttcgttccccccatcctatgatagcgtcaccagg
ggcctgagtgacagggtcaacattagcacatccagctcgatgcaaaatgaagatgaagcc
accaggaaggaggggaacagccctagacctcagtga
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integrated database retrieval system
