Phodopus roborovskii (desert hamster): 127236005 Help Entry 127236005         CDS       T08852                                  Symbol Plxna1 Name (RefSeq) plexin-A1 isoform X1   KO K06820   plexin A Organism prob  Phodopus roborovskii (desert hamster) Pathway prob04360   Axon guidance Brite KEGG Orthology (KO) [BR:prob00001]  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     127236005 (Plxna1) BRITE hierarchy Motif Pfam:  Plexin_cytopl TIG Plexin_RBD TIG_2 Sema TIG_plexin PSI RasGAP PSI_integrin Motif Other DBs NCBI-GeneID:  127236005 NCBI-ProteinID:  XP_051059351 LinkDB All DBs Position Unknown AA seq 1947 aa AA seqDB search MEHLGRSMGLQGRPEAGTFSGEHDSKASRAKKPSPMMLTPKGPEYLDLRSQPIMPLLTLS PRTLLLLLLLLLKSVWMAISSPPAGVGPQPAFRTFVASDWGLTHLVVHEQTGEVYVGAVN RIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGLGSTDNVNKLLLLDYAANRLLA CGSASQGICQFLRLDDLFKLGEPHHRKEHYLSSVREAGSMAGVLIAGPPGQGQAKLFVGT PIDGKSEYFPTLSSRRLMANEEDADMFGFVYQDEFVSSQLKIPSDTLSKFPAFDIYYVYS FRSEQFVYYLTLQLDTQLTSPDAAGEHFFTSKIVRLCVNDPKFYSYVEFPIGCEQAGVEY RLVQDAYLSRPGQALAKQLGLAEDEDILFTVFAQGQKNRVKPPKESALCLFTLRAIKEKI KERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDDFCGQDFNQPLGGTVTIEGTPLFVD KDDGLTAVAAYDYQGRTVVFAGTRSGRIRKILVDLANPSGRPALAYESVVAQEGNPILRD LVLSPNRQYLYAMTEKQVTRVPVESCVQYTSCELCLGSRDPHCGWCVLHSVCSRQDACER ADEPQRFASDLLQCVQLTVQPRNVSVTMSQVPLVLQAWNVPDLSAGVNCSFEDFTETESI LEDGRIHCRSPSAREVAPITQGQGDQRVVKLYLKSKETGKKFASVDFVFYNCSVHQSCLA CVNGSFPCHWCKYRHVCTNNAADCAFLEGRVNVSEDCPQILPSTHIYVPVGVVKPITLAA RNLPQPQSGQRGYECLFHIPGSPARVTALRFNSSSLQCQNSSYSYEGNDVSDLPVNLSVV WNGNFVIDNPQNIQAHLYKCPALRQSCGLCLKADPRFECGWCVDERRCSLRHHCPADSPN SWMNAHHGSSRCKDPKILKLSPETGPRQGGTRLTITGENLGLRFEDVRLGVHVGKVLCSP VESEYISAEQIVCEIGDASTLRAHDALVEVCVQDCSSGYRALSPKRFTFVTPTFYRVSPS RGPLSGGTWIGIEGSHLNAGSDVAVSIGGRPCSFSWRNSREIRCLTPPGQTPGSAPIIIN INRAQLSNPEVKYNYTEDPTILRIDPEWSINSGGTLLTVTGTNLATVREPRIRAKYGGVE RENSCMVYNDTTMVCRAPSIHNPTRSPPELGERPDEIGFIMDNVRTLLVLNSSSFLYYPD PVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLNYTVLIGSTPCILTVSETQLLCE APNLTGQHKVTVRAGGFEFSPGMLQMYSDSLLTLPAIVGIGGGGGLLLLVIVAVLIAYKR KSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTYAM RVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQRSFSMRDRGNV ASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLL YKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKTLTLNCVN PENENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVPYSQRPKAGDMDLEWRQGRMARIILQ DEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQTSAYNISNSSTFTKSLSRYESMLRT ASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLDQREGDRGSKMVSEIYLTRLLATKGT LQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHQIHDSDVRHTWKSNCLPLRF WVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNY KSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYIAKYKDEILVA LEKDEQARRQRLRSKLEQVVDTMALSS NT seq 5844 nt NT seq  +upstreamnt  +downstreamnt atggagcatctgggcaggagtatgggactccagggaagaccagaagctggcaccttctct ggagagcatgactccaaggcctccagggccaagaaacccagtcctatgatgcttacccct aaaggacctgaataccttgacttgaggtcccagcccatcatgccactgctaaccctgagc cctcggacgctgctgctgctgctgctgctgttgttgaagagtgtgtggatggctatcagc tcacccccagctggtgtgggtccacaacctgccttccgcacctttgtggccagtgactgg ggccttactcacctggtggttcatgagcagacaggagaagtatatgttggcgcagtgaac cgcatctacaagctgtcagggaacctgaccctgcttcgggcccatgtgacaggccccgta gaagataacgagaaatgctacccacctcccagtgtacagtcctgcccacatggcctgggg agcacagacaacgtcaacaagcttctgctgctggactatgctgccaaccgcctgttggcc tgtggcagtgcctcacagggcatctgccagttcctgaggttggatgatctcttcaagctg ggtgagccacaccaccgtaaggagcattacctgtccagtgtccgagaggctgggagcatg gcaggagtactcattgctgggccacctggccagggccaggccaagctctttgtaggcacg cccattgatggcaaatcagagtacttccccacgttgtccagtcgccggctcatggccaac gaggaagatgctgacatgtttggctttgtatatcaggacgagtttgtgtcatctcagctc aagatcccatcagacacactgtccaagttcccagcctttgacatctactatgtgtacagt tttcgcagcgagcagtttgtttactacctcaccctgcagctggacacacagcttacctcg cctgatgccgctggtgagcacttcttcacctccaagattgtgcggctgtgtgtaaatgac cccaagttctactcttatgtggagtttcccattggctgtgagcaggctggagtggagtac cgcctggtgcaggatgcctacctgagccggccaggccaggccctagccaagcagctgggc cttgctgaggatgaagacatattgttcaccgtgttcgcacagggccagaagaaccgtgtg aagccacccaaggagtcggcgctgtgcctgttcacactgcgggccatcaaggagaaaatc aaagagcgcatccagtcatgctaccgtggagagggcaagctttcacttccttggctgctc aacaaggagctgggctgcatcaactcgcccctgcagatcgatgacgacttctgtgggcag gacttcaaccagccactggggggcacggtcaccatcgagggcacacccctttttgtggac aaggatgatggcctgactgctgtggctgcctatgactaccaaggccgcactgtggttttt gccggcactcgaagtggtcgcatccgcaagattctggtggacctcgcaaaccccagtggg aggccagccctggcttatgagagtgtggtggctcaggagggcaaccctatcctgcgagac cttgtcctcagccccaaccgccagtacctctatgctatgacggaaaagcaggtgacaagg gtacctgtggaaagctgtgtgcagtatacttcctgtgagctgtgcctggggtctcgggac ccccactgtggctggtgtgtcctgcacagtgtttgctctaggcaggatgcctgtgagcgg gcagatgagccccagcggtttgcttctgacctgctgcagtgtgtgcagttgactgtccag ccacgcaatgtgtcagtcaccatgtcccaggtgccgcttgtgctgcaggcttggaatgtg cctgacctctcagctggtgtcaactgctcctttgaggacttcacagaaactgagagcatc ctggaagatggccgcatccattgtcgctcaccctctgcccgggaagtagcacccatcaca cagggccagggagaccagcgagtggtgaagctctacctcaagtccaaagagaccgggaaa aagtttgcatctgtggactttgtcttctataactgcagtgttcaccagtcctgcctggca tgtgtcaatggctctttcccttgccactggtgcaaataccgtcacgtgtgcaccaacaat gcggccgactgtgcctttctagaaggacgtgtcaatgtgtctgaggactgcccacagatc ctgccttctacccacatctatgtgccagtgggtgtggtgaagcccatcaccttggctgca cggaacctgccacagccacagtcaggtcagcgagggtatgagtgccttttccacatccca ggcagcccggcccgcgtcactgcactgcgcttcaacagctccagcctgcaatgccagaac tcctcgtactcctatgaagggaatgatgtcagcgacctacctgtgaacctatcagttgtg tggaatggcaactttgtcattgacaatccccagaacatccaggcccacctctacaagtgc ccagccttgcgccagagttgcggcctctgtctcaaggctgacccgcgctttgagtgtggc tggtgtgtagacgaacgccgctgttccctacgtcaccactgcccggctgactcaccaaac tcctggatgaatgctcaccatggcagcagccgctgcaaagaccccaagattctcaagctg tccccagagacaggccctcgccagggagggacaagactcaccatcactggcgagaatctg ggcctgcggttcgaggatgtgcggttaggagtgcacgtgggcaaagtgctgtgcagccct gtggagagcgagtacatcagcgcagagcagattgtctgtgagatcggagatgccagcaca ttgcgggcccatgatgccctggtggaggtgtgtgtacaagactgctcttccggctaccga gccctgtcccccaagcgcttcacctttgtgacaccaaccttctaccgtgtgagcccctcc cgtgggcctctgtctggaggcacttggattggcatcgaaggaagccatctgaatgcaggc agtgatgtggctgtgtccattggtggccgcccctgctccttctcctggaggaattctcga gagatccgctgcctgacaccacctgggcagacccctggcagcgcccctattattatcaac atcaaccgtgcccagctctccaaccccgaagtgaagtacaactacactgaggatcccact atcctcaggattgaccctgagtggagcatcaacagtggtgggaccctcctaacagttaca ggcaccaatctcgccaccgtccgtgaacctagaatccgggccaaatatggaggtgttgag agggagaatagctgcatggtgtacaatgacaccaccatggtgtgccgggcgccatctata cacaacccaacgcgcagcccaccagaactgggagagcggccagatgagattggtttcatc atggacaatgtacgcacactgctagtactcaacagctcttcatttctctactacccggac cctgtactggagccactcagccctactgggctcttggagctgaagcccagctccccactc atcctcaagggacggaatctcctgccacctgctcctggcaattcccggctcaactacaca gtgctcatcggctccacaccctgtatcctcaccgtgtctgagacacagctgctgtgtgaa gcacccaatcttacagggcaacacaaagtcacggtgcgggctggtggctttgagttctca cctgggatgctgcagatgtactccgatagcctgcttacactgccagccatcgtgggtatc ggtgggggtgggggtctcttgctgctggtcatcgtggccgtactcattgcctacaaacgc aagtcacgggatgctgaccggaccctcaagcggctgcagctacagatggacaacctggag tcacgcgtggcccttgagtgcaaggaagcctttgcagaactacagacagacatccatgag ctgaccagtgacctggatggtgctggcatcccattccttgactaccgcacatatgccatg cgagtgctgttccctgggattgaggaccatcctgtactgaaggagatggaggtgcaggcc aatgtggagaagtcgctgacactgtttggacagctgctgaccaagaagcacttcctgttg accttcatccgtacactggaggcccagcgtagcttctccatgcgtgaccgtgggaatgtg gcgtcactcatcatgacggctctgcagggtgagatggagtatgccacaggtgtgcttaag cagttgctttctgacctcattgagaagaacctagaaagcaagaaccaccccaagctgctg ttgcggaggactgaatccgtggcagagaagatgctgaccaactggttcaccttccttctg tataagttcctcaaggagtgtgctggggagcccctcttcatgctgtactgtgccatcaag cagcagatggagaagggccccattgatgccatcacaggggaggcccgctactccctgagt gaggacaagctcattcggcagcagattgactacaagaccctgaccctgaactgtgtgaac cctgagaatgagaatgcacctgaggttcctgtgaaggggctgaactgcgacactgtgaca caggtcaaggaaaagctactggatgctgtgtacaagggtgtgccttactcacagcggccc aaggctggggacatggacctggagtggcgccagggtcgcatggcacgcatcatccttcag gacgaggatgttaccaccaaaattgacaacgactggaagaggctgaacacactggctcac tatcaggtgacagatggctcatcagtggcactagtacccaagcagacatctgcctacaac atctccaactcctccaccttcactaagtcccttagcagatacgagagcatgctgcgtaca gccagtagccctgacagcctacgctcacgaacacccatgatcacgccagacctggaaagt ggcacaaagctctggcacctggtaaagaaccatgaccacctggaccaacgtgagggtgac cgtggcagcaaaatggtctctgagatctacctgacaaggctgctggccaccaagggaaca ctacagaagtttgtggatgacctgtttgagaccatcttcagcacagcgcaccgtggctct gccctgcctctggccatcaagtacatgtttgacttcttggacgagcaggccgacaaacac cagatccatgactctgatgtgcgccatacctggaagagcaattgcctgcccttgcgcttc tgggtgaatgtgatcaagaacccgcagtttgtgtttgacatccacaagaacagcataacg gatgcctgcctctccgtggtggcgcagaccttcatggattcctgctctacatcagagcac aagctgggcaaagactcaccctccaacaagttgctctatgctaaggacatccccaactac aagagctgggtcgaaaggtactatgctgacattgccaagatgcctgccatcagtgaccaa gacatgagcgcctacctggcggagcagtcccggctgcatcttagccaattcaacagcatg agtgccctgcatgagatctactcctacatcgccaagtacaaggatgagattctggtagcg ctggaaaaagacgagcaggcacgaaggcagcggcttcggagcaagctggagcaggtggtg gacacaatggccctgagcagctga

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