Phodopus roborovskii (desert hamster): 127237012
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Entry
127237012 CDS
T08852
Symbol
Pom121c
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C
KO
K14316
nuclear pore complex protein Nup121
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127237012 (Pom121c)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127237012 (Pom121c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127237012 (Pom121c)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127237012 (Pom121c)
BRITE hierarchy
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
127237012
NCBI-ProteinID:
XP_051060989
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MSPAAAAAGGVERRRPPLGVREGRGRIRGCGGPAGAAALGLALLGLALYLVPAAAALAWL
AVGASAAWWGLSREPRGSRGLSSFVRDSRRQPRPALTASPAPAKSAVNGSLCEPRSPLGG
PDPAELLLMGSYLGKPGPPQPALAQDPRDRPGRRPPSRSPPPTSAAQRVHHVYPALPTPL
LRPSRRPPHRDCGSLSNRFVITPRRRYPIQQAQYSLLGSLPTVCWNGGHKKAVLSARNSR
MVCSPVTVRIAPPDSKLLRSPMPEQILNTTLSSPSNNVPDPCAKETVLSALKEKKKRTVE
EEDQLPLDGQENKRRRHDSSGSGHSAFEPLVANGVPAAFVPKPGSLKRGLASQSSDDHLN
KRSRTSSVSSLTSTCTGGIPSSSRNAITSSYSSTRGLSQLWKRSGPTSSPFSSPASSRSQ
TPERPAKKTREEEPCHHPSSSAPLVTDKESPGEKVTDTATGKQQNSWTSPPTPGSSGQRK
RKIQLLPSRRGDQLTLPPPPELGYSITAEDLDMERKASLQWFNKVLEDKTDDASTSATES
PPAANPPFSFTLPAASSASLPVPSSNPLLESLKKMQDSPSPAPPSSEPAAATTTAAPSPL
KTPSLLTPLVSPLTGPLASTSSDSKPTATFLGLAPASSATPLTDTKSPGVPQAEQAVSTA
ASTAPSPTPKPSMLFGMLSPPATSSLATTGPACSPMFKPIFMATPKSENDSPLPSISSAT
TTTTSSSITLPTTASSTTPTFKPIFDSVEPVTSMPLSAPFSLKQTTATATTTATPAPLFT
GLDTAASTVASSTTASASKLVFGFGVTTVASTASSTMTSASQPLLFGGGPPVTAASSAPA
LPSIFQFGKPPATAASAASTSFTQPLASSSQTAAGSGSGFGGFGSTLTTTSSAAPTTSQP
TLTFSSTISPAFNIPFSSGAKPALPAYPGANPQPTFGATEGATKPALAPSFGSSFTFGNS
VASAPSAAPAPGTFGSAAQPAFGGLKAAASAFGTPASTQPAFGSTTSVFSFGSATTSGFG
ATTQTTQSGSSSSLFGSSTPSPFTFGGSAAPSGSGGFGLGATPGTSSTSGTFSFGSGQSG
TTGTTTSFGGSLNTLGTANQSSPFAFNVGSTPESKPVFGGTSTPTFGQSTPAPGVGTAGS
SLSFGASSTPAQGFVGVGPFGSAAPSFSIGAGSKTPGARQRLQARRQHTRKK
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagcggctgcggcggctggcggagtcgagcggcggcggcctccgttgggtgtg
cgggaaggccggggccggatccgcggctgcggaggaccagcgggagccgcggcacttggc
ctggcgctgctcggcctcgcgctctacctagtgcccgcggcggccgcgctggcctggctg
gccgtgggggcgagcgcggcctggtggggcctgagtcgcgaaccccgcggctcgcggggc
ctgtcgtcgttcgtgcgggactcgcgccgccaaccgcggcccgcgctcactgcttcgccg
gccccggctaagtcagcggtcaacggcagcctctgtgagccccgcagcccgcttggaggc
cctgaccccgctgagctcttactcatgggcagctacctcggcaagcccggcccccctcag
cctgccctagcgcaggaccctagggacaggccgggccgccgcccaccctcacgctccccg
ccgccgacgtcggcggcccagcgagtccaccatgtctatcccgcgcttcccaccccactt
ttacgaccctctcggaggccgccgcaccgagattgtgggtctttatccaatcggtttgtt
ataacacctcgaagacggtatcccattcagcaggcccagtattccttgcttgggtcactg
ccaacagtgtgctggaatggtggtcacaagaaggctgtgctatctgcacggaactcaagg
atggtgtgtagtccagtgaccgtgaggattgcccctccagacagcaagttacttcgctca
ccaatgccagagcagatactcaacacaacattgtcctcaccatcaaataatgtcccggat
ccttgtgcgaaggagactgtgctgagtgccctcaaagaaaagaagaaaaggacagtggag
gaagaagaccagctacctcttgatggccaggaaaacaagagaaggcgtcatgatagcagt
gggagcgggcattcagcattcgagccccttgtggccaacggagtccctgctgcatttgtg
cctaaacctggctccctgaagagaggtctggcttctcagagctcagatgaccacttaaac
aaacggtctcgtacctcctctgtgagctccttgactagtacatgcacaggaggcatcccc
agctccagccgcaatgccatcactagctcctacagctccacccgtggcctctcacagctg
tggaagaggagtggtcccacctcatcccccttttccagcccagcttcctcccgttcccag
acaccagagaggccagccaagaaaacaagagaggaggagccatgtcaccatcccagttct
tcagctcccttggtaacagacaaggagtccccaggagaaaaggttacagatacggccact
gggaagcagcagaactcttggacctccccacctacacctggcagctctgggcaacgcaaa
cgcaaaattcagttgctgccctcccggcgaggggaccagctcactctgcctccgccccct
gagctaggttattccatcactgctgaagacctggacatggagaggaaagcctccttgcag
tggtttaacaaggttttggaggacaagacagatgacgcctccacctcggccactgaaagc
ccacctgctgccaaccctcctttctcattcaccttgcctgctgcctcatcagcctccctc
ccagtgcccagctctaacccactgttggagagcttgaagaagatgcaggactctccatct
ccagccccaccatcctcagagcctgctgcagcaacaactactgcagccccttctcctctg
aagacacccagcctcctgactcctctggtctcacctctgacagggccattggccagcacc
tcctcagactctaaacctacagccacattcctggggctggcccctgcttcatctgcaaca
ccactcactgacaccaagtcccctggagtccctcaggctgagcaggctgtcagcactgca
gcctccacggctccctcccccaccccaaagcccagcatgctgtttgggatgctgagccca
cctgccacttcctccctcgccacgactggcccagcttgctctcccatgtttaagcccatt
tttatggccacacctaaaagtgaaaatgatagccccttgccatctatctcctcagccacc
actacaacaacttcatccagcatcaccctccccacaacggcgagttccacaactcccact
ttcaagcccatttttgacagtgtggagccagttacatccatgcccctgtcagccccattc
tccctgaagcagacaactgctacagccaccactacagccacaccagcccctctcttcacc
ggcctggacactgctgcctccacggtggcctccagcaccacagcttctgcctcaaagctt
gtgtttggcttcggagtgaccactgtggccagcaccgccagcagtaccatgacttcggcc
tcccagccacttctgtttggaggagggcctcctgtcactgctgccagttctgccccggcc
ctgccctccatcttccagtttggcaagccccctgccacagcagcctctgcagcaagcacc
tcctttacccagccccttgccagctcttcccagacagcggccggcagcggcagtggcttc
ggtggctttggcagcaccctcaccaccacctcctcagccgctcccaccaccagccagccc
acactgaccttcagcagcaccatcagccctgccttcaacattccctttagctctggtgcc
aagcctgcactcccagcttaccctggagccaacccacagcccacgtttggagccactgag
ggggccaccaagccagcacttgccccaagttttggcagctctttcacttttggcaactct
gtggcctccgccccatcggcagctccagcaccaggcacctttggcagcgctgcacaaccg
gctttcggcggcttgaaggcagcggcctcggcctttggcacccctgccagcacgcagccg
gctttcgggagcaccacgtctgtgttctcctttggttcagccaccacctctggctttggt
gccaccacgcagaccacccaaagtgggagcagcagttctttatttgggagctctactcca
tccccgttcacgtttggtggctcagcagctccttctggcagcggaggctttgggcttggt
gctactccaggcaccagctccacctctggaactttcagctttggatctggacagagcggg
accacgggcaccaccacctcctttgggggaagtctgaacaccctgggcacagccaaccag
agctcacccttcgccttcaacgtgggcagtacgcctgaaagcaagcctgtgtttggaggc
acatccacacccacttttgggcagagtacccctgcccctggagtaggcaccgcaggcagc
agcctctcttttggggcctcctcaacacctgcccaaggctttgttggagtcggacctttc
gggtcagcggccccttcgttttccattggcgcgggatccaagaccccaggggctcgacag
cgacttcaggcccgaaggcagcacacccgcaagaagtag
DBGET
integrated database retrieval system
