Prodigiosinella aquatilis: PCO85_03825
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Entry
PCO85_03825 CDS
T09220
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00521
Streptomycin biosynthesis
prod00523
Polyketide sugar unit biosynthesis
prod00541
O-Antigen nucleotide sugar biosynthesis
prod01100
Metabolic pathways
prod01110
Biosynthesis of secondary metabolites
prod01250
Biosynthesis of nucleotide sugars
Module
prod_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PCO85_03825 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PCO85_03825 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PCO85_03825 (rfbC)
Enzymes [BR:
prod01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PCO85_03825 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WJV54589
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All DBs
Position
791816..792376
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AA seq
186 aa
AA seq
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MNVIDTEIPDVKIIEPVVFGDERGFFMETWQQKKFEDMVVKRPCNFVQDNHSKSRQGILR
GLHYQTENAQGKLVRVISGEVYDVAVDIRKSSSTFGQWTGVYLSAENKRQLWIPEGFAHG
FYVTSHEAEFVYKCTDYYNPNAEQSILWNDPDLGIEWPLTGIPVLSEKDKKGIYFNSICG
VEAKLF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttatcgatactgaaatccctgatgtaaaaattattgaacccgttgtatttggt
gatgaacgtggcttttttatggaaacctggcagcaaaaaaaattcgaggatatggtagta
aaacgcccttgcaattttgttcaggacaatcattcaaaatcgagacaaggcattttacgc
ggtcttcattatcagactgagaatgcccaaggtaagttggtgcgtgttatttctggtgag
gtttacgatgtcgccgttgacatacgtaaatcgtcatccacgtttggtcaatggaccggt
gtttacctttctgctgaaaacaagcgtcaactttggattcctgaaggatttgcgcatggt
ttttatgtgaccagtcatgaagccgaattcgtttataaatgtactgattattataatccc
aatgctgagcagtccattttatggaatgaccctgatcttggtattgaatggccgttgaca
ggaatccctgtcttatccgaaaaagataaaaaaggtatatatttcaatagtatttgtggt
gttgaagccaaattgttttga
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