Prodigiosinella aquatilis: PCO85_04970
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Entry
PCO85_04970 CDS
T09220
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00250
Alanine, aspartate and glutamate metabolism
prod00410
beta-Alanine metabolism
prod00430
Taurine and hypotaurine metabolism
prod00650
Butanoate metabolism
prod01100
Metabolic pathways
prod01110
Biosynthesis of secondary metabolites
prod01120
Microbial metabolism in diverse environments
prod02024
Quorum sensing
Module
prod_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PCO85_04970
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PCO85_04970
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PCO85_04970
00430 Taurine and hypotaurine metabolism
PCO85_04970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCO85_04970
Enzymes [BR:
prod01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
PCO85_04970
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WJV54790
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Position
1056310..1057692
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AA seq
460 aa
AA seq
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MPIHHVDLNNQSSRLDIYATKASQDSLPKYQLPKGRTEPRAAYALVRDELLLDGNARQNL
ATFCTTWVEDEVKQLMTDSIDKNMIDKDEYPQTAEIENRCVHIIADLWHANKSRKTVGCS
TTGSSEAAMLGGLAFKWAWRKRREAAGKDTSKPNIVTGPVQICWKKFARYFDVEIREVPL
EGDALGLKPEDLRQYCDENTIGVVATLGVTFTGIYEPVEALAKELDAMQHDLGLDIPIHV
DAASGGFIAPFIQRDLVWDFQLERVKSINASGHKYGLAPLGVGWVIWASQEDLPEELIFY
VDYLGGNMATFALNFSRPGGEIIAQYYNFLRLGREGYTAVQQACSDTAQWLGEKLAAIEC
FEMVYDGHGGLPAVAYKLTDTVQGFTLYDLSERVRMGGWQIASYPLPMNRQETVVQRILI
RHGVSRDLAQLLLDDIKRAIDHLTKNPILNSTAKPGFHHG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccatcacgttgatttaaataaccagtccagtcggttggatatttatgccacg
aaagcctcacaagacagcctccccaagtatcagcttccaaaaggtcgtactgaacctcgc
gctgcctatgcgcttgtccgggatgaacttttgctggacgggaatgctcgccagaacctt
gcaaccttctgcaccacgtgggtggaggacgaggtcaagcaactcatgaccgactcgatc
gacaaaaacatgatcgacaaagatgagtacccccaaacagccgaaatcgaaaatcgctgt
gtccacatcattgctgatctctggcacgctaataaatctcggaaaacggtggggtgttca
acgaccggatcaagcgaggcggccatgctgggcggtctggcgttcaagtgggcatggcgt
aagcgccgggaagcagcaggtaaggatacgagcaagccaaacatcgtgacgggtccggtg
cagatctgttggaagaaattcgctcggtatttcgatgttgagatccgtgaggtgccactg
gaaggagacgcccttggtttgaaacctgaagacctacgccagtattgcgacgaaaacacg
atcggtgtcgtggcgacgctgggtgtcaccttcactggtatctatgaacccgttgaggcc
ctggcgaaggaactcgatgcaatgcagcatgacctcgggctcgatattcccatccacgtg
gatgcggcatccggcggattcatcgcccctttcattcagcgcgaccttgtctgggatttc
cagctggaacgtgtcaaatctatcaacgcctctggccacaaatatggcctggcccccctt
ggtgtgggctgggtgatctgggcatcccaggaagacctgcccgaagagttaatcttctac
gtggattacctcggtggcaacatggccacatttgcgttgaacttctcgcgccccggcggc
gagatcatcgcgcaatattacaactttctgcgtcttggccgcgagggttatacagcggtc
cagcaggcctgctctgacactgcccaatggctgggtgaaaagctggcggcgatcgagtgt
tttgagatggtctatgatggtcatggcggtcttcccgcagttgcctacaagctaaccgat
acggttcaaggcttcacgctttacgatctgtcggaacgggtacggatgggcggatggcag
atcgcttcctatccattgccaatgaaccgtcaggaaacggtcgtccaacgcatcctgatc
cgtcatggggtcagtcgggatctggcgcaactgcttctcgacgatatcaagcgagcgatc
gatcacctcacgaagaacccgattctgaactctacggcgaagccggggttccatcatggc
tga
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