Prodigiosinella aquatilis: PCO85_06595
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Entry
PCO85_06595 CDS
T09220
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
prod
Prodigiosinella aquatilis
Pathway
prod01501
beta-Lactam resistance
prod01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCO85_06595
01503 Cationic antimicrobial peptide (CAMP) resistance
PCO85_06595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prod02000
]
PCO85_06595
01504 Antimicrobial resistance genes [BR:
prod01504
]
PCO85_06595
Transporters [BR:
prod02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PCO85_06595
Antimicrobial resistance genes [BR:
prod01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PCO85_06595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Crp
Motif
Other DBs
NCBI-ProteinID:
WJV55084
LinkDB
All DBs
Position
complement(1400678..1403824)
Genome browser
AA seq
1048 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIMVMLTGMLAIVKLPVAQYPTIAPPAVQITASYPGADAKTLQDS
VTQVIEQNMNGIDNLLYMSSSSDSSGTAQITLTFDAKTNPDIAQVQVQNKLQLAMPLLPR
EVQQQGVSVQKSSSSFLMVIGFISDDKNMTQQDIADYIGSTIKDPISRVMGVGDTELFGA
QYAMRIWLDPNKLNNYQLTTSDVVNAITVQNNQIAAGQLGGTPSVPGQKLNASIIAQTRL
NSPEQFSNIILRVNKDGSQVRLKDVARVELGGESYSTVARYNGQPASGLGIKLATGANAL
DTATAIKAEIAKLQQQFPAGMKVVYPYDTTPFVTISINEVVKTLIEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIM
TEEGLSPKEATRKSMGQIQGALVGIALVLSAVFVPMAFSGGSTGAIYRQFSVTIVSAMVL
SVLVALILTPALCATILQPTINHGHDEKRGLFGWFNKLFGKSTTHYSDSVARILHSTGRY
VLLYMIIVVGLGLLFTRIPSSFLPEEDQGVLLTMVQLPVGSTQESTQKVLDKVSNYYLEH
EKNNVKSVFTVNGFGFAGRGQNMGLAFASLKDWKERPGSKNKVSAIIGRAYGALSQIKEA
LVIPFNIPAIVELGTASGFDFELIDEGNLGHEKLMAARNQLLGMIAQHPDTLIRVRPNGM
EDTPQYRIDIDQEKAEALGVSISDINSTLSTALGGSYVNDFIDRGRVKKVYVQADAPFRM
LPKDIQNWYVRGTSGQMVPFSAFSSAHWEYASPRLERYNGLPSIELVGEATPGKSTGEAM
AMMEKLASQLPKGIGFDWTGMSYQERLAGNQAPALIVVSAIVVFLCLAALYESWSIPFSV
MLVVPLGVLGAVIATSMRGLENDVYFKVGLLTTIGLSAKNAILIVEFAKDLMQKEGKGLI
EATLDASRMRLRPILMTSLAFILGVLPLAISTGAGSGAQNAVGTGVMGGMITATILAIYF
VPVFFVVVRRRFDKKKGNDVVDQSIEHH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatagatcgccccatctttgcatgggtaatcgccattatggtgatg
cttaccgggatgctggcaattgttaaactgcccgttgcgcagtacccgactattgcacca
ccagcagtacagatcaccgcatcttatccaggtgctgatgctaaaacacttcaggacagt
gtcacgcaggttatcgaacagaatatgaatggtatcgataatctgctgtatatgtcttcc
agtagtgactcttcaggtacagcgcaaattaccctgacctttgatgccaaaaccaatccc
gacattgcccaggttcaggtacagaataagctacagttggcaatgccgctgcttcctcgg
gaagtacaacagcaaggcgtgagtgttcagaaatccagcagcagctttctgatggttatc
ggttttatcagtgatgataaaaacatgactcagcaggatattgctgactacataggctcc
actattaaagacccaatcagccgtgtaatgggcgtaggtgatactgagttgttcggtgcc
caatatgccatgcgcatctggctcgatcctaacaagctgaataactatcagctcaccaca
tcagatgtggtgaatgccattacagtgcaaaacaaccagattgccgctggtcaactgggt
ggtactccgtcagttccagggcaaaaactgaatgcgtccattattgcgcaaactcgcctt
aactcccctgagcagttctctaacataatccttagggtcaataaggatggctctcaggtg
cgtcttaaagacgtagcaagagtagagctgggaggggaaagttacagtactgtcgcacgc
tacaatggtcagccagcctctggtctcggtattaaacttgctactggagccaatgcgtta
gataccgccactgctataaaggcggaaatagcaaaactgcaacagcaattcccggcaggg
atgaaggtagtttacccctatgacaccacacctttcgttacgatttcgatcaacgaggta
gtgaaaaccctgatcgaagctatcgttctggtgtttttggtgatgtatctgttcttgcaa
aacttccgtgcaacgctgattcctactattgcagtgccggtagtattgttagggactttt
gcgattttgtctgcgtttggttattccattaatacactgacaatgttcgcgatggtgcta
gccatcggtctgctggtagatgacgccattgttgtcgtggaaaacgtcgaacgcataatg
accgaagaaggtctgtcccccaaagaagcaacacgcaaatcgatggggcagattcagggg
gcattggtcggcatcgcgcttgttctatcagctgtattcgttcctatggctttctctggc
ggttcaaccggggccatctatcgacagttttctgtaaccatcgtgtcagccatggtgctt
tcagtgttagtggcgttgattctaacccctgcgctttgtgccacaattctgcagccaacc
atcaatcatggtcacgatgaaaaaagaggcttatttggttggttcaataaactatttgga
aaaagtaccactcactattctgatagtgttgccagaatactgcacagtaccggccgctat
gttctcctttatatgattatcgtggtgggcttggggctgttgtttacacggataccaagc
tctttcctaccagaagaagatcaaggggttctgttgaccatggtgcaattacctgtcggg
tcgacacaggaaagcacacagaaagttctcgacaaagtaagtaattactatctggagcat
gaaaaaaataacgttaagtccgtttttactgttaatggctttggttttgctggtcgaggc
caaaacatgggtctggcgtttgccagcctgaaagactggaaggaacgtcctggttcgaaa
aataaagttagtgctattatcggaagggcttacggcgcactttcacagattaaagaagcg
ttggtcatcccttttaatattccggctattgttgagctaggcactgccagcggatttgac
ttcgagctcattgacgagggtaatcttggccatgaaaaattgatggcagctcgtaaccaa
ctgttgggaatgattgctcaacatcctgatacgttgatacgcgtacgtccgaatggcatg
gaagatacgccgcaatatcggattgacatcgaccaggagaaagcagaggcattgggagtc
tcgatttctgatattaactcaacgctttctactgcattaggtggtagttacgtcaatgac
ttcattgatcgtggcagggtgaaaaaagtttatgttcaggctgatgcccctttccgtatg
ttgcccaaagatatccagaactggtatgtccgtggcacatcagggcaaatggtccctttc
tccgcattctcatcagcacattgggaatacgcctcacctcgtctggaacgctataacggc
ttaccttctattgaactggtgggtgaagctactccgggtaagagtactggtgaagcaatg
gcaatgatggagaaattggcatcgcaattaccgaaaggtattggctttgactggaccggg
atgtcttatcaggaacgtttggctggtaaccaggctcctgcattgatcgttgtttcagcc
attgtcgtgttcttatgcctggcagcgctgtatgagagttggtctatcccattctcagtt
atgctggttgttcctcttggtgtattgggtgcggttattgcaaccagcatgcgtggcttg
gaaaatgacgtttactttaaggtagggctgctgaccaccatcgggctttcagcgaaaaat
gctattttgatcgtcgaattcgccaaagatctgatgcaaaaagaaggtaagggtttaata
gaagcaacgttggatgccagccgtatgcgtctacgtcctattctgatgacatcattggcc
ttcattctcggtgttcttccgctcgctatcagcacgggtgctggttctggcgcacagaat
gctgtcggcaccggtgtgatgggggggatgattacggcaacaatactcgccatttacttt
gtgcctgtattctttgttgtcgttcgacgccgcttcgataaaaagaaaggtaatgatgtg
gtagatcaatctatagaacaccattaa
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