Prodigiosinella aquatilis: PCO85_08595
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Entry
PCO85_08595 CDS
T09220
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prod03400
]
PCO85_08595
DNA repair and recombination proteins [BR:
prod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PCO85_08595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zinc_ribbon_2
zf-tcix
AAA_22
AAA_16
SLFN-g3_helicase
zf-ribbon_3
UPF0547
Motif
Other DBs
NCBI-ProteinID:
WJV55428
LinkDB
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Position
complement(1838038..1839798)
Genome browser
AA seq
586 aa
AA seq
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MSFTLRPYQQDAVTATLDYFRHHTTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHEKYCALGLEANIFAAGLQQRQSQGKVVFGSVQSVARNLALFEQAFSLLIIDECH
RVSDDDSSQYQQIIHHLQQSNAQLRLLGLTATPYRLGKGWIYQYHYHGMIRGDEHCLFRD
CIYELPLRYMIKHAFLVPPQRLDMPVVQYDFSQLSAHSNGLFSEEDLNRELKRQQRVTPQ
IIHQIVEYAADRNGVMIFAATVEHASEIERLLPDGQAALISADTPAARRDSLIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLSAGKTDCLILDYAGNP
HDLYTPEVGKRKPHSDSQPVQVFCPQCGFANLFWGKCTDDGTVIEHYGRRCQGWSEDEDG
RRQQCDYRFRFKTCPHCGAENDIAARRCHQCEEILVDPDDMLKAALKLKDALVLRCSGMS
MVHGLDTKGEWLNITYHDEDGAEVSERFRLQTPAQRHVFQIHFLRVHLRAPGIPFHWQTA
AEITQQQPLLRAPDFVVARQQGKFWQVREKIFDYQGRYRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttacactgcggccttatcagcaagatgccgtaacagccaccctcgactacttt
cggcaccacactacacccgccgtgatcgttctgcccactggcgcgggaaaaagtctggtg
atcgccgaactggcccggttagcccgtggtcgcgtgctggtgctggcgcatgtcaaagag
ctggtagcgcagaaccacgaaaaatactgtgccctggggctggaggccaacatctttgcc
gccggactgcaacagcgacagagtcagggcaaggtggtttttggcagcgtacagtcagtc
gcccgcaatctggccctgtttgaacaggctttttcattattgattattgatgaatgccac
cgggtcagcgacgacgatagcagccaatatcagcaaattattcatcatctccaacaatcc
aatgcacagttgcgtttgctgggactgactgctacaccctaccgcctgggaaaaggctgg
atctatcaataccactaccacggcatgatccggggtgatgagcactgcctgttccgggac
tgcatttatgagttaccgctacgctacatgatcaagcacgcttttctggtgccgccacag
cgcctggatatgccagtagtacagtatgatttcagccagttgagcgctcacagtaacggt
ttattcagcgaggaagaccttaaccgtgaattgaaacgtcaacaacgggttacaccacaa
attatccaccagattgtcgaatatgccgccgatcgtaacggggtgatgatttttgccgcc
acggtggaacatgccagtgagattgaacgtttgctacccgacggtcaggccgcgcttatc
agcgctgacacaccagcagccagacgtgattcgctgattgaggcgtttaaacagcaacaa
ttgcgctatctggtcaatgtcgccgtattaaccaccggttttgatgctcctcacgtagac
gttatcgccattctacgcccgaccgaatccgtcagcctctatcagcagatcgtcgggcgc
ggtttgcgattgtctgcgggaaaaactgattgtctgattctcgactacgccggtaatcca
cacgacctgtatacacccgaagtcggcaagcgtaaaccgcatagcgatagccagccagta
caggtcttctgcccacagtgcggctttgccaatctgttctggggcaaatgtaccgacgac
ggcaccgtgattgaacactacgggagacgctgtcaggggtggagtgaggatgaggatggc
cgccgtcaacaatgcgattaccgctttcgtttcaaaacctgtccgcactgtggagcagaa
aatgatattgccgcccgccgttgccatcaatgtgaagaaatactggtagacccggacgac
atgctgaaagcggcgctaaagctgaaagacgcgctggtactgcgttgcagtggtatgagt
atggttcatggcctggataccaaaggcgaatggttgaacatcacctatcatgatgaagat
ggtgctgaagttagtgagcgtttccgcttgcagacaccggcccagcggcacgtttttcag
atccattttctacgcgtccacctgcgtgcgcccggtatccccttccactggcagactgcc
gccgagatcacacagcaacaaccgctactgcgagctcccgattttgttgtcgcacgccaa
caaggcaaattctggcaagtgcgggaaaaaatattcgactaccagggccgctaccgcaga
gcgaatgaactgcgcggctga
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