Prodigiosinella aquatilis: PCO85_22750
Help
Entry
PCO85_22750 CDS
T09220
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
prod
Prodigiosinella aquatilis
Pathway
prod01501
beta-Lactam resistance
prod01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCO85_22750
01503 Cationic antimicrobial peptide (CAMP) resistance
PCO85_22750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prod02000
]
PCO85_22750
01504 Antimicrobial resistance genes [BR:
prod01504
]
PCO85_22750
Transporters [BR:
prod02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PCO85_22750
Antimicrobial resistance genes [BR:
prod01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PCO85_22750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
WJV53901
LinkDB
All DBs
Position
complement(4888361..4891498)
Genome browser
AA seq
1045 aa
AA seq
DB search
MSKFFIERPIFAWVIAIVVMLAGGLSILNLPINQYPNIAPPAIQVSVTYPGASAETVQKT
VVQVIEQQLNGIDNLRYIESNSNSDGSASIIVTFDQGTDPDIAQVQVQNKVSLAESQLPT
EATEQGIRVAKYQSNFMMVVSLISTDGKMTDADLGNLLVSKLEDPIVRTKGVGDFLVMGA
EYAMRIWLDPAKLYKYSLVPSDISTAISQQNVQVSSGALGGLPTVKNAKFSATIIGKTRL
ETVQQFQNILLKVNSDGSQVRLKDVAAVDLGPKSYSISSTFDGKPSTGIALRLASGANLL
DTANAVRATLHGLESSLPEGVKIEFPYDTSPVVSASIEEVVKTLLEAIVLVFMVMLLFLQ
NLRATLVTTMVVPVVLLGTFGILFACGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
HYEKLGPKEATIKSMQQIQGALFGIAMVLSAVLVPMAFFSGSTGIIYRQFSITIVSAMAL
SVLMALIFTPALCATILKPSAGERATTGFAGAFNRMFVRGTVSYTRGVGHVINKRSLFLL
VYLMIVGVTGYLFTRVPTTFLPDEDQATLMIQVSLPANASAERTQQVVQKIKDYLLTDEK
DIVSSVFAANGFSFAGRGQNSAMAFVRLKDWSERPKASQSVQALAGRVMQHFATLKQGQV
IALVPPAVMELGNATGFDFYLQDTNSQGHDALVAEMNQFLSLARQDPRLSMVRHNGMADE
PEYHLVIDDERARALGLSLEDINDTLSTAWGSSYVNQFMYQGRVKDVYLQGKATSRVTPE
DLNQWYFRNSSNQMVPYSAFGSGKWGYGSPRFERFNGLSAVNIMGSPAAGYSSGDAVKAV
DEIAAKLPKGFRVQWHGLSYEEQSAGSQTTALYTLSVLMVFLCLAALYESWSIPFSVLLV
VPLGVLGTIGAVLLRGLSNDVFFQVGLLTTVGLAAKNAILIVEFAKELHERDGKDIVEAA
IDAARLRIRPIIMTSMAFVLGVLPLTISHGAGAGSQHSIGTAVAGGMITATFLAIFFVPM
FYVVVVRLFDRRRTKTPATEVQQHD
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagttctttatcgaacgcccaattttcgcctgggtgatcgccattgtagtgatg
ctggcgggggggctctctatcctcaatcttccgatcaaccagtacccaaacatcgcgccg
ccggcgattcaggtgtcggtaacctatccaggggctagcgccgagacagtacaaaaaacc
gtagtgcaggtgatagaacagcaactcaacggtattgacaatctgcgctacattgaatcc
aacagcaatagcgatggcagcgctagcattattgttaccttcgatcagggcaccgatccg
gatatcgcccaagtgcaggtgcagaacaaagtgtctctggcggaatcgcagttgccgacc
gaagccacagaacagggtatccgggtagcgaaataccagtccaacttcatgatggtcgtt
agcttgatttccaccgacggtaaaatgactgacgctgacctgggcaaccttttggtctcc
aaactggaagatcccatcgtgcgtaccaagggggtgggcgactttctggttatgggggcg
gaatacgccatgcgtatctggctggacccggccaaactgtataagtattcattggtacca
agcgacattagcaccgccatttcgcagcaaaacgtccaggtgtcctcgggcgcactgggt
ggtttaccgacagtgaaaaacgctaaattcagcgccaccattattggcaaaacccggctg
gaaacagtgcagcaattccaaaatatcctgctgaaggtcaacagcgacgggtcacaggtg
cggctcaaggatgttgcggcggtcgatctcgggccgaaaagttacagtatttcttccact
tttgacggcaagccctccaccggtatcgcactgcgtctcgcgagcggagctaacttgctc
gacaccgccaatgcggtgcgtgccaccctccacggccttgagtcttctttgccggaaggt
gtgaagattgaatttccgtacgatacctcgccggtggtcagcgcctcaattgaggaagtg
gttaagacgctattggaagccattgtgttggtgttcatggtgatgctgctgttcctgcag
aatctgcgtgctacgctggtcaccaccatggtggtgccggttgtactgctcggcactttc
ggcatactgtttgcgtgcggttactccatcaacacactcaccatgttcggcatggtgctg
gcgataggcttgctggtagatgacgccatagtggtagtggagaacgttgaacgagtgatg
cactatgagaaattggggccgaaggaagccactatcaaatcgatgcagcagattcaaggg
gctctattcggcatcgccatggtgctgtcagcggtgctggtgccgatggcgttcttcagc
ggctccaccggtatcatttaccgtcagttctccataaccatcgtatcggcgatggcacta
tctgtgttgatggcgctgatcttcaccccagcattgtgcgccacaatactcaaaccatcg
gccggtgagcgagccaccaccggcttcgccggtgcctttaaccgcatgtttgttcgtggg
acggtgagttatacccgtggtgttggccatgtcatcaataaacgctcactgttcttactg
gtgtatttgatgatcgtcggggtcaccggctacctattcactcgcgtgccaacgacattt
ctacctgatgaagaccaggctactttgatgattcaggttagccttccggccaatgcttct
gccgagcgtactcagcaagtcgtgcaaaaaatcaaggactatctgctgaccgatgagaag
gatatcgttagctcggtatttgctgccaacggctttagcttcgccggccgcggtcagaac
agcgctatggctttcgtgcgtcttaaagactggagcgagcgccccaaagctagccaaagc
gtccaggcgctggcggggcgcgtcatgcaacatttcgccacgttgaaacagggtcaggtc
atcgcgctcgtaccgccggcagtgatggagcttggcaacgccaccggcttcgatttttat
ctccaggatactaacagtcaggggcatgatgcactggtggccgagatgaatcagttccta
tcgctggcccgtcaggatcctcggttgtccatggttcgccacaatggtatggcggatgag
ccggaataccacctggtgatcgatgacgagcgagctcgtgcgcttgggctcagcctggag
gatatcaatgacacactgtccactgcctggggctccagctatgttaaccagttcatgtac
caaggacgagtcaaggacgtctatctacaaggtaaagccacttcgcgtgttacgccggag
gatcttaatcagtggtacttccgtaacagcagcaaccagatggtgccgtactcggcgttc
ggtagtggtaaatgggggtatggttcgcctcgctttgagcgcttcaacggcctgtcggcg
gtaaatatcatggggtcgcctgcggctggctacagttccggcgatgcggtgaaagcggtg
gatgaaattgccgccaaactgcctaaaggtttccgtgtccaatggcatggcttgtcctat
gaggagcagagtgccggttctcagactaccgcgctatatactctttcggtgctgatggtg
tttctgtgtctggctgcgctgtatgagagctggtcgattccgttctcggtattgctggta
gtgccacttggggtactcggtaccatcggcgcggtgttgctgcgcggactgtctaatgat
gtatttttccaggtgggtctgctgaccaccgtcggacttgcggccaagaacgccattctg
atcgtcgaattcgccaaggaattacatgagcgggacggcaaagatatcgtcgaggccgct
attgatgctgcacgtctgcgtatccggcccatcatcatgacttcaatggcattcgtgctc
ggggtactaccgctgaccatttcccacggcgccggcgccggcagtcagcactcgatcggc
accgctgttgctggtggtatgatcaccgctaccttcctggccattttctttgtaccgatg
ttttatgttgtcgtggtgcgcctgtttgaccgccgacggaccaaaacgccggccaccgag
gtgcaacaacatgattga
DBGET
integrated database retrieval system
