Pedobacter roseus: H9L23_20535
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Entry
H9L23_20535 CDS
T06980
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
proe
Pedobacter roseus
Pathway
proe00521
Streptomycin biosynthesis
proe00523
Polyketide sugar unit biosynthesis
proe00541
O-Antigen nucleotide sugar biosynthesis
proe01100
Metabolic pathways
proe01110
Biosynthesis of secondary metabolites
proe01250
Biosynthesis of nucleotide sugars
Module
proe_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
H9L23_20535 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H9L23_20535 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H9L23_20535 (rfbC)
Enzymes [BR:
proe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
H9L23_20535 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QNN41470
UniProt:
A0A7G9QDP5
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All DBs
Position
complement(4995707..4996255)
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AA seq
182 aa
AA seq
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MEIEQTGLKDCLIIKPRVFEDPRGYFFESFNQNTFEEKTGLSGRFVQDNQSYSSYGVIRG
LHAQTGEFAQAKLVRVTKGEVLDVAVDVRPSSPTYGKHIAVRLSAENKLQLYIPRGFVHG
FSVLSETAEFLYKCDNFFNKASETGVIYNDSDLNIDWLIPEKDQAVSDKDLVLKPFAKLQ
HI
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaacaaacaggattaaaagactgcttaattattaaaccaagggtctttgaa
gatcccaggggttattttttcgaaagctttaatcaaaatacttttgaagaaaaaacgggt
ttatcaggaaggtttgtacaagataatcaatcttactcttcttatggggtaatccgtggc
ttgcatgcccaaacaggagagttcgcacaggcaaaattggttcgtgtgaccaaaggtgag
gtattggatgttgccgtagatgtacggccgagctcaccaacgtatggtaaacacattgcg
gtacggttaagtgcagagaacaagctgcaattatacattcctagaggatttgtacatggc
ttctcagtattaagtgaaacggcagagtttttatataaatgtgataactttttcaataaa
gcctcagaaacaggagtgatttataatgattcagatttgaatatcgattggctgatcccg
gaaaaagatcaggctgtatctgataaagatctagttttaaaaccatttgccaaactacag
catatatga
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