Prosthecochloris sp. SCSIO W1103: OO005_09550
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Entry
OO005_09550 CDS
T09697
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OO005_09550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
proi03019
]
OO005_09550
03009 Ribosome biogenesis [BR:
proi03009
]
OO005_09550
Enzymes [BR:
proi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OO005_09550
Messenger RNA biogenesis [BR:
proi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OO005_09550
Ribosome biogenesis [BR:
proi03009
]
Prokaryotic type
rRNA helicases
OO005_09550
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UZJ36992
UniProt:
A0A9E8J474
LinkDB
All DBs
Position
complement(2073251..2075011)
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AA seq
586 aa
AA seq
DB search
MTTKKHVPPTGFRDLGLSDQVLEALDDVGYETPTPIQLQTIPIILEGGDILGQAQTGTGK
TAAFALPLLSTVDLSKAEPQVLVLTPTRELAIQVAEAFQRYAAFMDDFHVLPIYGGQDYS
GQLRRLKRGVHVVVGTPGRVMDHIRRKTLVLDGLKTLVLDEADEMLRMGFVDDVEWILDK
TPASRQVALFSATMPSEIRRISRKYLRDVSEIAIKAKSSTVETITQRFLPVSGQHKLDAL
TRILEIEHFDGIILFVRTKTATLELSEKLRARGYAAAALNGDMVQKHREKTIGQFKGGEY
NMLVATDVAARGLDVERISHVINYDIPTDTESYVHRIGRTGRAGRSGEAILFVTPREMSM
LRTIEKAIRKRIDRMELPSTESINDKRIVRFKQQISDTLSTADLGFFRDLVESYCYEHEV
TAIDAASALASLYQGDTPLLISAKSQKSSRRKKDGSAPGDTGNKSFKREKDPLYDVIDYE
RYRLEVGEKHGVKPGNIAGAIINEIGVESGAVGRISIFEDYSTVELPEGMPKDVLRELGK
VWVCGQQLRASRLTKDFGGRKKLSVKDKRKPKKKSKRVSRVKGKRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaaaaaacatgtcccaccaaccggattcagagaccttgggctttcggatcag
gtactcgaggctctcgacgatgtgggttacgaaacacctacccccattcagcttcaaacc
attccaattattctcgaagggggagatattctcggccaggctcagaccggtaccggtaaa
acggctgcgtttgcattgccattgctttcaacggtcgatctttccaaagctgaacctcag
gtgctggtgctcaccccgacacgagagcttgcgatacaggtagcggaagcctttcagcga
tacgcagccttcatggatgatttccatgtactcccgatttacggaggacaggattacagt
ggtcagcttcggcggctgaaacggggagtgcatgtcgtggtcggtacaccgggaagggtt
atggaccacatcaggaggaaaacccttgttcttgacgggttgaagactcttgtgctcgac
gaggccgatgagatgcttcgcatgggctttgtagacgatgtcgaatggattctcgataaa
acaccagcttcacggcaggtggcgcttttttcggcaaccatgccttcggaaattcgccgt
atttcaagaaaatatcttcgtgacgtatcagaaatcgcgatcaaggcaaagagctccacg
gtcgaaacgataacacaacgatttcttcctgtttcaggtcagcacaagctcgatgcactt
acccgtattctcgagatcgagcatttcgacggtataatactttttgtccgtacaaagacc
gccacactcgagttgtccgagaagctgagggccagagggtatgctgctgcggctcttaac
ggtgatatggttcagaagcaccgcgagaaaaccatcggacagttcaagggaggggagtat
aacatgcttgttgcaacggatgtcgcagcaagaggcctcgatgtcgagagaataagtcat
gtgatcaattacgatataccgaccgatacggaaagttatgttcaccgaataggtcgaacc
ggtcgtgctgggcgaagcggtgaggcgatacttttcgtcacccctcgtgaaatgtcgatg
ctgcgaacgatagaaaaagccatcaggaagcgtatcgacaggatggaattgccatcgacc
gagagcatcaatgacaaacgcatagtacgtttcaaacagcagatcagcgatacgctttcg
acggccgatctcggttttttccgtgatcttgtagagtcatattgttatgagcatgaagtg
acagccatcgatgcggcttcggctcttgcaagtctctaccagggtgacacccccttgctc
atatcggcaaaatcacaaaagtcttcgcgacggaaaaaggatgggagtgctcctggagat
actggtaacaaatcttttaagcgagaaaaagatccgctttacgatgttatcgattatgag
cgttaccgtttggaggtgggagagaaacacggggtgaaaccggggaacatcgccggtgcg
attatcaatgaaattggtgtcgaaagtggtgcagtaggacggatcagcatctttgaggat
tacagcacggtcgaactgcctgaaggcatgccgaaggatgtcttgagagaactcggcaaa
gtgtgggtatgcggtcagcagctccgtgcgtcgaggcttacaaaagattttggcggacgg
aaaaagctttcggtaaaagataagcgaaaaccgaaaaagaagtccaagcgtgtatcccga
gtcaaaggcaaaagaggttga
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