Prosthecochloris sp. GSB1: CHL67_00385
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Entry
CHL67_00385 CDS
T04996
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pros
Prosthecochloris sp. GSB1
Pathway
pros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHL67_00385 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pros03019
]
CHL67_00385 (recQ)
03400 DNA repair and recombination proteins [BR:
pros03400
]
CHL67_00385 (recQ)
Enzymes [BR:
pros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHL67_00385 (recQ)
Messenger RNA biogenesis [BR:
pros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CHL67_00385 (recQ)
DNA repair and recombination proteins [BR:
pros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHL67_00385 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ASQ89595
UniProt:
A0A222SFB6
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All DBs
Position
complement(79119..80987)
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AA seq
622 aa
AA seq
DB search
MTNTIHLDKTRRTAFSDRQILDTLGKVFGFSEFRPNQEGIVRAILEGRDVFAVMPTGGGK
SLCYQLPSMLLPGTCMVVSPLIALMKDQVDGAKANGIRAACLNSSLKPEEQASVRRDLLA
GSVDLLYVAPERFALDSFRQLLGQINVGLAVVDEAHCISEWGHDFRPDYLSLSALVELFP
DSPVAAFTATATPKVQDDILRKLSLREPCTVRASFDRPNLFYDIRFKEKLADQLVQLLKD
NSGRAGIVYRTSRKSVNETAAMLQSKGFRALPYHAGLNDDDRRRNQEAFIRDEADVIVAT
IAFGMGIDKSNIRFVIHADLPKSIESYYQETGRAGRDGEPARCTMFFSRSDIPKARFFID
TIENETERAEALDALQKLVALASTSVCRRKTLLDHFGEAYRRENCGGCDICVGTRETIDC
TVEAQMLLSAVARTEQRFGAMHIVDIVTGSRNRKILDFGHDRLKTWGVGREKGKKFWKQL
IDELLAQKIVARAEGLYPALYLLDKAVAVLKGETTVHMARAQEQEKKPDKAGRGTAEESC
DRELFELLRSLRKEIADEQGVPPYIVFSDRSLRDMASSFPVTAEAMLSVPGVGEVKLERY
GRRFLQLIRRYREEHPESSFSP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacacgatccaccttgacaaaacccggcgaaccgccttttccgacaggcagatt
ctcgacactctcggcaaggtgttcggtttcagcgagttccggccgaaccaggaaggaatc
gtccgggcgattctcgagggacgggacgtgttcgccgtgatgcctaccggaggaggcaaa
tcgctctgctaccagcttccctccatgctgcttccaggaacctgcatggtcgtcagtccg
ctgatcgcgctcatgaaagaccaggtggacggcgcgaaggcgaacggcatccgcgcggcc
tgcctcaacagctcgctcaagccggaagagcaggcgagcgtccggcgcgacctgctcgcc
ggctcggtcgacctcctctatgtcgcaccggaacggttcgcgctcgacagcttccgccag
ttgctcggacaaataaacgtaggactggcggtggtcgacgaggcgcactgcatttccgaa
tggggacacgacttccggccggactacctgtcgctctcggccctggtcgaactctttccc
gattcacccgtggccgcgttcacggcgaccgcgacaccgaaagtgcaagacgacatcctc
cgtaaactctcccttcgcgagccctgtaccgtgcgcgcatccttcgaccgccccaacctt
ttctacgatatccgcttcaaggaaaaactcgcggatcagctcgtgcagctcctgaaagac
aattccggcagggcaggcatcgtctaccgcacgagccgcaaaagcgtgaacgaaacagcc
gccatgctgcaatcgaagggatttcgcgcccttccctaccacgccgggctgaacgacgat
gaccgccgcagaaaccaggaagccttcatccgcgacgaagccgacgtgatcgtggccacg
atagctttcggcatgggcatcgacaaatctaacatccgcttcgtgatccacgcggacctg
ccgaaaagcatcgaaagctattatcaggaaaccggcagggccgggcgggacggggaaccg
gcgcgctgcacgatgttcttctcccggtcggacatcccgaaggcccgcttcttcatcgac
acgatcgagaatgaaaccgaacgggcggaagccctcgacgcactgcagaagctcgttgcg
ctcgcctcgacgtcggtctgtcggcgcaaaacgctgctcgaccatttcggcgaggcgtat
cgccgggaaaactgcggaggatgcgacatctgcgtcggcacgagggaaacgatcgattgc
acggtcgaagcccagatgctgctctcggcggtagcgcgcaccgagcaacggttcggcgcg
atgcatatcgtcgatatcgtaaccggcagccgaaaccggaaaatcctcgatttcggccat
gatcgcctgaaaacatggggcgtcggccgggaaaaaggcaagaagttctggaaacagctc
atcgacgaactgctggcgcagaagatcgtcgccagagccgaggggctctacccggcgctc
tacctgctggacaaggccgtggcggtgctgaaaggcgagacgacggtacacatggcgcgg
gcgcaggaacaggaaaagaaaccggacaaggctggcaggggaacggcggaggagagctgc
gaccgtgagcttttcgaactgctgcggtcgctgagaaaagaaatcgccgacgaacagggc
gtcccgccctatatcgtcttttccgaccgctcgctccgtgacatggcctcctctttcccg
gtaaccgcggaagcgatgctctcggtaccgggagtgggcgaagtgaaactggagcgctac
ggccgccgcttcctccagttgatcagaaggtaccgcgaggagcatcctgaaagcagcttc
tcaccctga
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