Proteus sp. CD3: BTA34_13685
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Entry
BTA34_13685 CDS
T06244
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
prot
Proteus sp. CD3
Pathway
prot02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
prot00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BTA34_13685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prot03021
]
BTA34_13685
Transcription machinery [BR:
prot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BTA34_13685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CDC45
Motif
Other DBs
NCBI-ProteinID:
QEZ93321
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Position
3054720..3056576
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AA seq
618 aa
AA seq
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MEQNPQSQLKLLVTKGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENSNDTDDDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITAFIDPNAEEMAESED
VNLGKEDDEVADDAEDEDDDEDEDGDNDSDSDDDNSIDPELARQKFTELREQYEKTRQTI
KAKGRNHKDTELEILLLSEIFKQFRLVPKQFDYLVNNMRDMMDRVRAQERHIMRLCVDQV
KMPKKNFITLFTGNETNDTWFTAARAMNKPWSEKLAGIEEEVQRSLQKLQQIEVETGLTI
EQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMG
REPSPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSA
TSESLRSATHEVLAGLTLREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKAL
RKLRHPSRSEVLRSFLDE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagctacttgttactaaaggtaaggagcaaggc
tacctgacctatgctgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
atcgaagacatcatccagatgattaacgacatgggcattcaggttatggaagaagcacct
gatgccgatgatctgatgctggcagaaaattcaaatgatactgatgatgatgctgcagaa
gccgcagctcaggtgctttctagtgtagaatctgagattggccgtacaaccgaccctgtg
cgtatgtatatgcgcgaaatgggtaccgttgaactgctcacccgggaaggtgaaattgat
atcgcaaaacgcattgaagatggtattaaccaagttcaatgttctgttgcagaatatcct
gaagcaattacatatcttcttgaacagtatgatcgtgttgaagctggcgaagcacgtctt
tcagacttaattactgcgtttattgaccctaatgccgaagaaatggcagaaagtgaagat
gtcaatttaggcaaagaagatgatgaagttgccgatgacgctgaagacgaagatgacgat
gaagacgaagatggcgacaatgacagcgatagcgatgacgataacagcatcgatcctgaa
ttagcgcgccagaagtttactgagcttcgtgagcaatacgaaaaaactcgccaaactatc
aaggcgaaaggtcgtaaccacaaagatacagagcttgaaatcttattgttatctgaaatt
ttcaaacagttccgtttagtaccgaaacagtttgattatttagttaacaacatgcgtgac
atgatggacagagttcgtgctcaagagcgccacatcatgcgtctttgtgttgatcaagtt
aagatgccaaagaaaaacttcattacgctgtttacaggtaacgaaaccaatgacacatgg
ttcactgctgctcgtgcaatgaataagccttggtctgaaaagctggcaggtattgaagaa
gaagtacaacgcagtctacaaaaactgcaacaaattgaagttgaaactggactgacaatc
gaacaggttaaagatattaaccgtcgtatgtctatcggtgaagcaaaagcacgtcgtgcg
aaaaaagagatggtcgaagcgaacttacgtctcgttatctctatcgcgaaaaaatatacc
aaccgtggcttacagttccttgacctcattcaggaagggaatatcggtctgatgaaagcg
gttgataaatttgaataccgtcgtggttataaattctcaacttatgcaacatggtggatc
cgtcaggcaattactcgttcaatcgcggatcaggcgcgtacaattcgtatccctgttcac
atgatcgaaacgattaataaactgaaccgtatctcgcgtcaaatgttgcaagagatggga
cgagagccttcaccagaagagcttgcagaacgcatgctgatgcctgaagataaaatccgt
aaggtactgaaaatcgctaaagaaccaatctccatggaaacaccaatcggtgacgatgaa
gattcacatttaggtgattttatcgaggatactactctcgaattaccactggattctgca
acatcagaaagcttacgttcagcaactcacgaagtgttagcaggtttaacattacgtgaa
gcgaaagtcctgcgtatgcgttttggtatcgatatgaataccgaccataccttggaagaa
gtgggtaaacagtttgatgttacccgtgaacgtattcgtcagattgaagcgaaggctctg
cgtaaattacgccacccaagccgttctgaagtgttacgtagcttccttgatgagtaa
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