KEGG   Pseudoalteromonas rubra: AT705_07350
Entry
AT705_07350       CDS       T04179                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
prr  Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:prr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prr03400]
    AT705_07350
DNA repair and recombination proteins [BR:prr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     AT705_07350
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 AAA_22 DUF3638 zinc_ribbon_2 AAA SLFN-g3_helicase ERCC3_RAD25_C AAA_30 zf-ribbon_3 zf-tcix DZR
Other DBs
NCBI-ProteinID: ALU42783
UniProt: A0A0U3I4F6
LinkDB
Position
1:complement(1654607..1656361)
AA seq 584 aa
MFSGVPIYTLRPYQEEAVANTITHFKKSDDSAVIVLPTGAGKSLVIAQLARLAKHKILVM
THVKELVEQNAQKYQSYGLNASIYSAGLKQKEMLHQVTFASVQSLARNLEAIDSFYSLLI
IDECHRVSGEDDSQYMMVIERLRQFNPALKLLGLTATPYRLGSGWVYRSHYHGFVRGSEN
SPFHRCIYELPLRYMIKHGYLTPPNKLDPAIENYDFSALNSNAFGRFSEADMNQLLQSNT
RATKSIINHVVSLSKERHGVMIFAATVLHAKEIIGYLPTEQTALVIGDTDNRERDDIIAA
FKRREIKYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLSEGKKDCLVID
YAANEFDLFHPEVGSKKPNSDNEPVQVLCPGCGFGNIFWGKYDEQGRVIEHFGRRCQGLL
QDDEGNEQQCDYRFKFKECDSCGAENDIAARQCHSCGVMLADPDDKLRAALNLKNAMVIR
CSGLSGEVVKAQVLKITYFDEDGASVSEVFDFANPKSRHYFVRQFEKHCRTGVNVKAWTE
AAQVDATVLSAPDFVIARQHKKYGWQVAEKIFDYQGNYRTADKS
NT seq 1755 nt   +upstreamnt  +downstreamnt
atattctcaggtgtccctatttacacgctcagaccttatcaagaagaagcggtcgctaat
accatcacacattttaaaaagtccgatgatagcgctgttattgtgttgccaaccggtgct
ggtaaaagcctggtcattgcccagttagcacgactcgcgaaacacaaaattctggtgatg
acacatgtaaaagagctggttgagcaaaatgcccagaaataccaaagttatggtttaaac
gcgagtatttactcggcagggttaaagcaaaaggaaatgcttcatcaggtaacgtttgcg
agtgttcagtcactggcccggaatttagaagcgatagatagcttttattctctgctgatt
attgatgagtgccaccgtgtcagcggtgaggatgacagtcaatatatgatggttattgaa
cgcctgcgacaatttaatcctgctttaaagttattggggctgacagcaacgccatacagg
cttggtagtggctgggtgtatcgtagtcactaccatggctttgtacgaggtagtgaaaat
agccctttccatcgttgtatttatgaattaccgctgcgttatatgatcaagcatggctat
cttacaccgcctaataaactcgatccggctatagagaattacgatttctccgcgctaaat
agcaatgcatttggtcgtttcagtgaagcggatatgaatcagctgttacagagtaatacc
cgggcgaccaaaagcattattaaccatgttgtgtcactcagcaaagagcgtcatggcgtg
atgatatttgctgcgaccgtattacatgccaaagagatcattggttatttaccaacagag
caaacagccctggtgattggcgatacggataatcgtgagcgggatgacatcattgccgca
tttaaacgtcgagaaataaaatatttggtgaatgtatcggtattaactacggggtttgat
gcccctcatgtcgacgttattgcgatcttaaggcccaccgagtcggttagtttatatcag
caaattgtgggcagaggcctgcgcctcagtgaaggtaaaaaagactgcctggtaatcgat
tatgcagctaatgaatttgatttgttccatccggaggtggggagtaaaaagcccaactca
gataatgagcctgttcaggttttgtgtccgggctgtggttttggcaatatcttttggggt
aaatatgatgagcagggacgggttattgagcattttggcaggcgttgtcaggggttgttg
caggacgacgaaggcaatgagcaacaatgtgactatcgttttaagtttaaagagtgcgac
agttgtggtgccgagaacgacattgcggcccgtcagtgtcatagttgtggagtgatgttg
gcagatcccgacgataagctgcgggcggcactcaatttaaaaaatgccatggtgatacgc
tgcagtgggttaagtggtgaagtggttaaggcgcaagtgctgaaaatcacctattttgat
gaagatggcgcaagtgtcagcgaagtgtttgactttgcgaaccccaaaagtcggcactat
tttgttcgtcagtttgaaaagcactgccggactggcgttaatgtgaaggcatggacggag
gcggcacaggtggatgccactgtgttatcggcgccggattttgttattgcccgacaacat
aaaaagtatggctggcaggtggcagagaagatttttgattatcagggcaattatcgcacc
gcggataaaagctaa

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