Pseudoalteromonas rubra: AT705_07350
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Entry
AT705_07350 CDS
T04179
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_07350
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AT705_07350
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
DUF3638
zinc_ribbon_2
AAA
SLFN-g3_helicase
ERCC3_RAD25_C
AAA_30
zf-ribbon_3
zf-tcix
DZR
Motif
Other DBs
NCBI-ProteinID:
ALU42783
UniProt:
A0A0U3I4F6
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All DBs
Position
1:complement(1654607..1656361)
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AA seq
584 aa
AA seq
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MFSGVPIYTLRPYQEEAVANTITHFKKSDDSAVIVLPTGAGKSLVIAQLARLAKHKILVM
THVKELVEQNAQKYQSYGLNASIYSAGLKQKEMLHQVTFASVQSLARNLEAIDSFYSLLI
IDECHRVSGEDDSQYMMVIERLRQFNPALKLLGLTATPYRLGSGWVYRSHYHGFVRGSEN
SPFHRCIYELPLRYMIKHGYLTPPNKLDPAIENYDFSALNSNAFGRFSEADMNQLLQSNT
RATKSIINHVVSLSKERHGVMIFAATVLHAKEIIGYLPTEQTALVIGDTDNRERDDIIAA
FKRREIKYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLSEGKKDCLVID
YAANEFDLFHPEVGSKKPNSDNEPVQVLCPGCGFGNIFWGKYDEQGRVIEHFGRRCQGLL
QDDEGNEQQCDYRFKFKECDSCGAENDIAARQCHSCGVMLADPDDKLRAALNLKNAMVIR
CSGLSGEVVKAQVLKITYFDEDGASVSEVFDFANPKSRHYFVRQFEKHCRTGVNVKAWTE
AAQVDATVLSAPDFVIARQHKKYGWQVAEKIFDYQGNYRTADKS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atattctcaggtgtccctatttacacgctcagaccttatcaagaagaagcggtcgctaat
accatcacacattttaaaaagtccgatgatagcgctgttattgtgttgccaaccggtgct
ggtaaaagcctggtcattgcccagttagcacgactcgcgaaacacaaaattctggtgatg
acacatgtaaaagagctggttgagcaaaatgcccagaaataccaaagttatggtttaaac
gcgagtatttactcggcagggttaaagcaaaaggaaatgcttcatcaggtaacgtttgcg
agtgttcagtcactggcccggaatttagaagcgatagatagcttttattctctgctgatt
attgatgagtgccaccgtgtcagcggtgaggatgacagtcaatatatgatggttattgaa
cgcctgcgacaatttaatcctgctttaaagttattggggctgacagcaacgccatacagg
cttggtagtggctgggtgtatcgtagtcactaccatggctttgtacgaggtagtgaaaat
agccctttccatcgttgtatttatgaattaccgctgcgttatatgatcaagcatggctat
cttacaccgcctaataaactcgatccggctatagagaattacgatttctccgcgctaaat
agcaatgcatttggtcgtttcagtgaagcggatatgaatcagctgttacagagtaatacc
cgggcgaccaaaagcattattaaccatgttgtgtcactcagcaaagagcgtcatggcgtg
atgatatttgctgcgaccgtattacatgccaaagagatcattggttatttaccaacagag
caaacagccctggtgattggcgatacggataatcgtgagcgggatgacatcattgccgca
tttaaacgtcgagaaataaaatatttggtgaatgtatcggtattaactacggggtttgat
gcccctcatgtcgacgttattgcgatcttaaggcccaccgagtcggttagtttatatcag
caaattgtgggcagaggcctgcgcctcagtgaaggtaaaaaagactgcctggtaatcgat
tatgcagctaatgaatttgatttgttccatccggaggtggggagtaaaaagcccaactca
gataatgagcctgttcaggttttgtgtccgggctgtggttttggcaatatcttttggggt
aaatatgatgagcagggacgggttattgagcattttggcaggcgttgtcaggggttgttg
caggacgacgaaggcaatgagcaacaatgtgactatcgttttaagtttaaagagtgcgac
agttgtggtgccgagaacgacattgcggcccgtcagtgtcatagttgtggagtgatgttg
gcagatcccgacgataagctgcgggcggcactcaatttaaaaaatgccatggtgatacgc
tgcagtgggttaagtggtgaagtggttaaggcgcaagtgctgaaaatcacctattttgat
gaagatggcgcaagtgtcagcgaagtgtttgactttgcgaaccccaaaagtcggcactat
tttgttcgtcagtttgaaaagcactgccggactggcgttaatgtgaaggcatggacggag
gcggcacaggtggatgccactgtgttatcggcgccggattttgttattgcccgacaacat
aaaaagtatggctggcaggtggcagagaagatttttgattatcagggcaattatcgcacc
gcggataaaagctaa
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