Xylanibacter ruminicola: PRU_0085
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Entry
PRU_0085 CDS
T01212
Symbol
rfbC_1
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru00521
Streptomycin biosynthesis
pru00523
Polyketide sugar unit biosynthesis
pru00541
O-Antigen nucleotide sugar biosynthesis
pru01100
Metabolic pathways
pru01110
Biosynthesis of secondary metabolites
pru01250
Biosynthesis of nucleotide sugars
Module
pru_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PRU_0085 (rfbC_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PRU_0085 (rfbC_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PRU_0085 (rfbC_1)
Enzymes [BR:
pru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PRU_0085 (rfbC_1)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADE82766
UniProt:
D5EVF3
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All DBs
Position
109366..109920
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AA seq
184 aa
AA seq
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MEVRKTSIDGVFIIEPRIFEDSRGYFFESFSQREFEEKIGPINFVQDNESKSSYGVMRGL
HFQRPPFTQSKLVRCVKGAVLDVAVDIRKGSPTYGQHVAVELTEDNHRQFFIPKGFAHGF
AVLSETAVFQYKCDEFYHPEADGGISILDESLNIDWHIPTDKAILSDKDTKHPLLKDFET
PFNY
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaagttagaaaaacatcaattgatggtgtgttcattatcgaaccccgaattttcgag
gatagccgtggctatttctttgaatctttctctcaacgagagttcgaagaaaaaatcggc
ccaatcaatttcgttcaggacaacgagtccaaatcaagctatggcgtaatgcgtggcttg
cattttcagcgccctcccttcactcagagcaagctggttcgctgtgtcaaaggtgcagta
cttgatgtggctgtcgatatccgcaaaggcagccccacctatggccagcatgtggctgta
gaacttaccgaggataatcatcgtcagttctttatccccaagggattcgctcatggcttt
gcagtgttgagtgaaacagcagtattccaatacaagtgcgatgagttctatcaccctgag
gctgatggcggcatcagtatcttagatgaaagtctgaatatcgattggcatatcccaacg
gataaagccatcctctccgacaaggataccaaacatcccctcctcaaagattttgagact
cctttcaattactaa
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