Pyrgilauda ruficollis (rufous-necked snowfinch): 121349434
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Entry
121349434 CDS
T07608
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pruf03021
]
121349434 (RPAP1)
Transcription machinery [BR:
pruf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121349434 (RPAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Urb2
Motif
Other DBs
NCBI-GeneID:
121349434
NCBI-ProteinID:
XP_041315777
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MLSRPKPGESEADLLRFQSQFLAARASPAVKIVKKADKRKGKEGSTDAERPPLQDSKDVV
MLDGFPDTLPALTPAPPKKSKIKSASVHFEDEDPEEILESHDRHITAVFSKIIERDTSAV
AVTMPVPTGEPFPRTFHRSEIKSEVQLGSGRKSIFAQKMAAKKAAEKAATAPSAAECREV
RSAAPDALDPVGSVGEAPLPISRGDKDDDFLASQHPCLITGEGLGSQKSEQEAQAIHKEN
LEKLRSMSEEEILQEQARLLAQLDPGLVAFLKSQRGNNEGQKKELKMELNRPEEFVESLP
VAQHGVRSSLSMQESGLEEHVRKEENMKVEIMDDDLPVKPRKEWIHMDNVEFEKLEWMKD
LPSPRQKKTKKGMQARFSLKGELIPADADLPTHLGLHHHGEEAERAGYSLQELFHLSRSQ
VTQQRTLALQVLGRIVQRARAGEFASSLKGSVLRLLLDAGFLFLLRFSLDDAVENVMAAS
VGALRALLVSLDDEKYLDWTFSWYQGMATFPFVPNNEEEEEEEEEELNGTEKCQNKKLKD
ENKPDPDVARYDVVKGLLKTRIQHRLRYILEVVRPVPTVVLDILHILTHMARHSSEACSQ
LLDCPRLIETIVREFLPTQWDPKVAEPGFLLTSLHGVPCASAMKFIRVLASGGRNATARL
LNKFEMKSRLSRFVAEEPLDVPLPREEATRLSTESFRLWAVAAGYGQACDLYSDLYPVLV
RILQSLPELLSEKSPVVELSVQRAAAVVTLLTHVTQTAGYTAELQAKLSSNNSEDSERIP
PPPVAWSQVSGLQPFLETSLKKILQQLSQTETWQTLQPLTTTCVIFLGVYYSAYSQQPSV
NPVDCLEELERLTSEVLQPLLSQPAIESMWDLLRPCSALCNPLSCSLAPESVNSISSLSC
TGGKPPLSLVGSKSPFPFLTALLFLINNITHIHKGLTSKYSSVLGFRGLKDYLHQSWQSG
PPSVTPSSAWILRHEYHLQYFVLALARRMAGTCPDYTQHASLHHCVAMALLSRLLPGSEH
LAHEVLLDLAFNPEFLPEGKAGGPEAADFSDILHLGTSAKLSQPGSAAAFLPKVTRGALL
TESYQNLPSIRSCYLSHFVHLQPTLTRSQASYQGQNYLIQSMLLPEVRGPILPSDWPFFP
LISLYNKVTNAETHGAILNSLPLDLINTVTWNLQWVLLLETWRSKILQSIPTAAKLARLM
CVFLTGSDLFLEAPIHRYTAALLSVYCQPKVLDSLNLDAPLPGLASFHDLYISLLEQFEG
VSFGDPLFGVFVLLPLQKRFSVHLRLSVFGEHTNILRALGVPLQQFPVPLERYTSPPEDN
LNLLRLYFRTLVTGALRHTWCPVLYVVAVAHVNSFIFSQESTTQETDAARKSMLRKTWLL
VDENLKKHLLYYRLVNAESPLGFDLYEQLPPTRLKYLQIVTQKEITENAPALDL
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgagaccaaagcctggggagtccgaggcagacctgctgcgctttcagagccag
ttcctggcagcccgagcttcacctgcagtgaagattgtgaagaaagcagacaagaggaaa
gggaaggaagggagcacagatgctgagagacccccgctacaggacagcaaagatgtagtc
atgttggatggctttcctgatactctcccagctctaactccagctcctccaaaaaagtcc
aagatcaaaagtgctagtgtccactttgaggatgaagatccagaggaaatattggagagt
catgatcgacacattacagcagtcttcagcaaaattattgaacgagacacaagtgcagta
gcagtgaccatgccagtgcccacgggagaaccattcccaaggacatttcaccgctctgag
ataaaaagtgaggtgcagctgggatctggaagaaaaagcatctttgcacagaagatggca
gcaaaaaaagctgctgaaaaggcagcgacggctccctctgctgccgagtgccgggaagta
cgatcggctgctccggatgcgttggatcctgtgggatccgtgggagaggcgcctctcccc
atcagcaggggtgataaagatgatgactttttggcctctcagcatccttgtctcataacg
ggagagggtcttggaagccaaaagagtgagcaggaagctcaagctattcacaaagagaac
ttggagaagttgcggtccatgtctgaggaagagatcctgcaggagcaggcgaggcttctg
gctcagctggatcccggtttagttgctttcttaaaatcacaacgtggtaacaatgaaggc
cagaaaaaggaattaaaaatggaactgaacagaccagaggagtttgtggaatctctgcct
gtggctcagcatggtgtaaggtcatctctttccatgcaggagtcaggtctggaagaacat
gtaaggaaggaagaaaatatgaaggtagaaatcatggatgatgatctgcctgtgaagccc
aggaaggagtggattcacatggacaatgtagagtttgagaagctggaatggatgaaagat
ttgccctcacctcggcagaagaaaaccaaaaagggaatgcaagctcgattcagtttaaag
ggagagttgattcctgcagatgctgatttgccaacacatctaggcttgcaccaccatgga
gaagaggcagagagagctggttattctctgcaagagctctttcatctgtctcgcagccaa
gttacacaacagaggacactggctctacaggtcttaggtcgtattgttcaaagggccagg
gctggagagtttgcttcctccttgaagggcagcgttctgcgtctgctgcttgatgctggc
tttctcttcttgctgcgcttctcgctggatgatgcagtggaaaatgtcatggcagcatct
gttggtgctctccgggctctgctggtgtcacttgatgatgagaaatacctagattggact
ttctcatggtaccaagggatggctacattcccctttgtccctaacaatgaggaggaagaa
gaggaggaagaggaagagttaaatggaacagagaaatgtcaaaataaaaaattaaaggat
gaaaacaagccagacccagatgtggcccgatatgatgttgtaaagggacttttgaagaca
aggatccagcaccggctgaggtacatcctagaggtggtgcgacctgttccaacagtagtc
ctggatattctgcacatcctcacccatatggcaaggcactcctctgaagcatgcagccag
ctgcttgactgtcctcgactgattgagaccattgtcagggaatttctccctactcagtgg
gatcccaaagtggctgaaccagggtttttactgaccagtctccacggagttccttgcgcc
agtgctatgaagttcatcagggtgttggcatctggaggccgaaatgcaacagccaggctg
cttaacaaatttgaaatgaagagtcggttaagtcgctttgtcgctgaagagcctctggat
gtgcctctgccgagggaggaagccacgaggctgagcacggaatccttccggctgtgggct
gtggctgccggctacgggcaggcctgcgacctctacagtgatctctaccctgtgctggtg
aggatactgcagtcccttcctgagttgctcagtgagaagagccctgtggttgagttgtct
gtgcagcgagctgcagcagtggttactctgttgacacatgtgacacaaacagcaggatac
acggcagagctgcaggccaagttgagcagcaataactcagaagatagcgaacgaatccca
cctcctccagtagcatggagtcaagtgtcaggcttacagcccttccttgagacaagtctg
aaaaaaatccttcagcagctatcccagacagaaacttggcaaactctccagcctctgacc
acgacttgtgtgattttcttgggagtttattacagtgcttacagccaacagccatcagtc
aatccagttgattgcttagaggaactggaacgtttgacatcagaggtgctgcagcccctt
ctcagccagccagccatagagagcatgtgggacttgctcaggccatgttctgctttgtgc
aaccccctgtcctgttccctggcaccagaatctgtcaacagcatttcatctctgagttgc
actggaggcaaaccccctttgagcctggttggctctaagtcacctttccccttcctcact
gccctcttatttctcatcaataacatcactcacattcacaagggcctgaccagcaagtac
agctctgtgctgggcttcagaggcttgaaggattatctgcatcaaagctggcagagtgga
cctccctctgtgactccctcatctgcctggatcctgcgccatgaatatcacctgcagtac
tttgtgctagcgttggctcggagaatggcaggcacttgtccggattacacccagcatgcc
tcgctccatcactgtgttgccatggcattgctaagccgtctgttgccagggagtgagcat
ctggctcacgaggtcctactggatcttgcctttaatccagagtttcttcctgaagggaaa
gctggtgggccagaagcagctgacttctctgatattctgcatctgggcaccagtgccaaa
ctgtcacagcctggctctgcagcagcatttcttccaaaggttactcgtggtgcactgctg
acagaatcataccagaatctgccttccattcgttcctgctacctctcccactttgtccac
ttgcagcccacccttacgcgttctcaggcatcctaccaagggcagaattacctcatccag
tcaatgctgcttcctgaggtcagagggcccatcctgccttcagactggccattctttcca
cttatcagcctctacaacaaagtgactaatgcagagacacatggggccatactgaactct
ctcccacttgatctcatcaacactgtgacctggaacctgcagtgggtcttgttgctggaa
acctggcgttctaaaatccttcagagcatcccgactgctgccaaacttgctcggcttatg
tgtgtcttcctcactggcagtgacctctttctagaagcaccaatccaccgctacacagct
gcccttctctctgtgtattgccaacccaaggtcctggactccctgaacttggatgctcct
ctccctggtttggcatccttccacgatctctatataagtctcctggagcaatttgagggc
gtctcctttggagatccactctttggagtctttgttcttctacctctgcagaagcgtttc
agtgttcatctgcgtctctctgtttttggggagcacacaaatatcctgcgggcgctggga
gtgccattacagcagtttcctgtgcctcttgagcgctacacttcccctcctgaggataac
ctgaacctcctgcgactctacttccgaacgctggtcactggtgcgctgcgccacacctgg
tgccctgttctgtacgtggtggctgtggctcatgtgaacagttttattttctcccaagaa
agcacaacacaggagacagatgctgctcggaaaagtatgctgcggaagacgtggctgttg
gtggatgagaacttgaaaaaacacctgctgtactacagactggtgaatgcagagagtcct
ttgggatttgacctttatgagcagctccctcccacgcgactgaagtacctgcagatagtg
acacagaaagaaattacagagaatgcaccagcactagacttgtag
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