Pyrgilauda ruficollis (rufous-necked snowfinch): 121351368
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Entry
121351368 CDS
T07608
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
pruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121351368
03015 mRNA surveillance pathway
121351368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121351368
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121351368
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121351368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
121351368
NCBI-ProteinID:
XP_041319401
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSTLHLKDEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggccgtggacgagcaggaggcggcggccgagtcgttg
agcactttacacctgaaggatgaaaaaaccaaaccagatgccaatggtgccgttgtcaag
gcagatgacaatgtggagaagacggaggatgaggagaaggaggacagagctgcccagtcc
ttactgaacaagctgatccgcagtaacctggttgacaccacaaatcaggtggaggtgctg
cagagggaccccacatcacccctctactctgtcaagtctttcgaggagctgcgcctgaaa
ccacagctccttcaaggagtctatgccatgggcttcaacagaccatctaagatccaagag
aatgccctgcccatgatgcttgctgaacccccgcagaacctcatcgcgcagtcgcagtcc
ggtactggcaagacagctgcctttgtcctggccatgctcagcagggttgagcctgggaac
aagtatccacagtgtttgtgcctttccccaacatacgagctggcacttcaaacaggaaaa
gtgattgaacagatgggaaacttttacccggagctgaaacttgcgtatgctgtccgaggc
aacaaactggagagagggcagaagatctcagagcagatcgtaatcggcacacccggcact
gtgctggactggtgttccaaactgaaattcatcgatcccaagaagatcaaggtgttcgtg
ttggatgaggcagatgtgatgatcgccacccagggccaccaggaccagagcatccgcatt
cagagaatgctccccagagactgccagatgcttctgttttcagccacttttgaggattct
gtttggaagtttgctcaaaaagttgttcctgacccaaacattatcaaactgaagcgcgag
gaggagaccctggacaccatcaagcagtattacgtcctgtgcaataacagagatgagaag
ttccgggctctctgtaacatctacggggccatcaccatcgcccaggccatgatcttctgc
catactcggaagacggcggggtggctggcggcggagctgtcccgggagggccatcaggtg
gccttgctcagcggggagatgatggtggagcagagagcggccgtcatcgagcgctttcgg
gagggcaaggagaaggtgctggtgaccacaaacgtctgtgccagagggatcgatgtagag
caggtctctgttgttatcaattttgacctgcctgtggataaggatggaaatccagacaac
gagacctacctgcaccgcatcggccgcaccggccgcttcggcaagcgagggctggccatt
aacatggtggacagcaagcacagcatgaacattctcaacagaatccaggaacatttcaac
aaaaagataaacaaattggatactgacgacctggatgaaattgagaagataaataactga
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