Pyrgilauda ruficollis (rufous-necked snowfinch): 121352953
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Entry
121352953 CDS
T07608
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121352953 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pruf02000
]
121352953 (ABCB1)
04147 Exosome [BR:
pruf04147
]
121352953 (ABCB1)
04090 CD molecules [BR:
pruf04090
]
121352953 (ABCB1)
Enzymes [BR:
pruf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121352953 (ABCB1)
Transporters [BR:
pruf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121352953 (ABCB1)
Exosome [BR:
pruf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121352953 (ABCB1)
CD molecules [BR:
pruf04090
]
Proteins
121352953 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
Zeta_toxin
RsgA_GTPase
AAA_5
AAA_28
AAA_15
AAA_29
AAA_30
G-alpha
AAA_14
AAA_19
nSTAND1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
121352953
NCBI-ProteinID:
XP_041322341
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MHSEDEKKHTADGNSHEIAASSQDHESEDKHRAKKKQKKGEKPKVVSPFALFRYSSWSDK
LLMILGTLLAIAHGSSLPFAMIIFGDMTDSFVASGDTNFTGNISMNFTSEMLHKLEEDMT
RYAYYYSGIAAGVLLAAYIQTSFWTLAAGRQIKKIRENFFHAIMRQEIGWFDVNDVGELN
TRLLDDVSKINEGIGDKIGLLVQALTTFVTGFIVGLIRGWKLTLVILAVSPVLGLSAALW
AKVLSAFTDKEQAAYAKAGAVAEEVLAAIRTVIAFGGQEKEIKRYHKNLEDAKRIGIRKA
ITANISMGAAFLLIYASYALAFWYGTTLILSDDYTIGKVLTVFFSVLIGAFSIGQTAPSI
EAFASARGAAYAIFNIIDNEPQIDSYSETGYKPDHIKGNLELKNVYFNYPSRPDVEILKG
LNLKINSGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTVTIDGQDIKTLNVRYLREVIGV
VNQEPVLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPNKFETVVGERGAQLS
GGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTVVVAHRLSTV
RNADVIAVFEGGVITEIGNHAELLERKGIYYKLVNMQAIEAEVPSSENHENVLPSSENYE
TVLPLSENYENVRSVKNRESEPDSEESLTRGLRRRSTRRSMKKPGEQNDSPDEEKTSPAE
EIPPASFLKIMKLNKTEWPYFVAGTLCAIINGALQPAFAVIFSEIIGIFSETDKDILRKQ
SNLYSLLFLVLGIISFFTFFFQGFTFGKAGEILTMRLRFMAFKAMLRQDMAWFDNPKNST
GALTTRLANDASQVKGATGVRLALIAQNVANLGTGILISLIYGWQLTLLLLAVVPIIAVA
GMIEMKMLAGHAKKDKQELEAAGKIATEAIENIRTVVSLTRERKFESMYGEHLIVPYRNS
VKKAHIFGFCFALSQAMMFFTYAGCFRFGAYLVVNGHMEYKSVFLVFSAVVFGAMALGQT
SSFAPDYAKAKISAAHLFLLFERVPSIDSYSEEGDKPETFEGNITIKDVAFNYPNRPEVK
ILQGLNLKVEKGQTLALVGSSGCGKSTVVQLLERFYDPLDGEMLFDGKTAKALNIQWLRA
QIGIVSQEPILFDFTIAENIAYGDNSRQVSHEEIVSAAKQANIHSFIDSLPDKYNTRVGD
KGTQLSGGQKQRIAIARALVRKPQILLLDEATSALDTESEKIVQEALDKAQEGRTCIVIA
HRLSTIQNADKIAVVQNGRVIEQGTHQQLLAEKGVYYSLVNVQSG
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgaagacgagaagaagcatactgcagatggaaatagtcatgagattgctgca
tccagccaggatcatgaatctgaagacaaacacagggcaaagaagaagcagaagaaaggg
gaaaaacctaaggtggtgagcccatttgcactgtttcgatactccagctggtcagataaa
ttattaatgatactgggcactctgctggcaatagcccatggaagcagtctgccttttgcg
atgataatttttggtgatatgactgatagctttgttgcatctggagacacaaattttaca
ggaaacatttcaatgaatttcacttcagaaatgcttcacaagctggaagaagatatgaca
agatatgcatactactattctggaatagcagctggtgttcttcttgctgcttatattcag
acttcattctggaccttagcagcaggtcggcaaataaaaaaaattagagaaaattttttt
catgcaattatgagacaggaaattggatggtttgatgtaaatgatgtgggagaacttaac
actcgtcttctagatgatgtctccaagattaatgaaggaataggtgacaagattggattg
cttgttcaagcactaacaacatttgtgacaggatttattgttggtctcataagaggatgg
aaattaacccttgtaatactagcagttagccccgtcctgggactttcagcagccctctgg
gcaaaggttctctctgctttcacggacaaagaacaggctgcatatgcaaaagcaggtgct
gttgcagaagaagttctggcagcaatccgtactgtaatagcttttggaggacaggaaaaa
gaaattaaaagataccataaaaatttagaagatgctaaacggattggaataagaaaggct
attacagctaatatttctatgggtgctgctttcttactgatatatgcatcatatgcactg
gcattctggtatgggactactttgatcttaagtgatgattacactattggcaaagttctt
acagtctttttctctgtattgattggagctttcagtattggacagactgctccaagcata
gaggcatttgcaagtgcaagaggagctgcctatgccatctttaatataatagacaatgag
cctcaaattgacagttattcagagacaggttacaaaccagaccacataaaagggaacttg
gaattaaaaaatgtttacttcaattatccatccagaccagatgttgagatactgaagggc
ttgaatctcaagattaattctggccagacagtggccctggttggtggcagtggctgtggg
aaaagcacaacagttcagctcatccagagattttatgatcccaaggaaggcacggttacc
attgatgggcaggatattaagaccttaaacgtacggtatctgcgcgaggttattggtgtg
gtgaatcaggagcccgtgctctttgccactactattgcagaaaacattcgttatggccgt
gaggatgtcaccatggaggagattgaaaaagccaccaaggaggcaaatgcttatgacttc
atcatgaagctacccaataagtttgaaactgtggttggagaaagaggggcacagctcagt
ggaggccagaagcaaagaatagcaattgccagagctttggttcgcaatcctaaaattctt
ctgcttgatgaggcaacatcagctttggatactgagagtgaatcagttgtgcaagcagca
ctggacaaggcaagggaaggacgcaccacggttgtggtagctcatcgactgtcaacagtc
cgaaatgcagatgtgattgctgtgtttgaaggtggagttatcacagagatagggaatcat
gctgaattgcttgagagaaagggaatctactacaaacttgttaacatgcaggcaatagaa
gcagaagttccatcatcagaaaatcatgagaatgtacttccatcatcagaaaattatgag
actgtacttccattatcagaaaattatgagaatgtacgtagtgtcaaaaacagggaatct
gaaccagactctgaagaatccttaactagaggattgagaagacgatcaactcggagaagc
atgaagaagccaggagagcaaaatgatagtcctgatgaggaaaaaacttcacctgctgaa
gaaatacctccagcttcatttctgaaaattatgaagttaaacaaaactgaatggccatac
tttgtggctggaaccttgtgtgcaattatcaatggagctttacaacctgcatttgcagtt
atattttctgaaattattgggattttttcagagactgacaaggacatcttaagaaaacag
agcaacttatattcactgctgtttttagtacttgggatcatttccttttttactttcttt
tttcagggtttcacatttggcaaagctggagaaattctgacaatgaggcttcgattcatg
gcatttaaagcaatgcttagacaggatatggcctggtttgataatcctaaaaatagcact
ggagcattaactacaagacttgctaatgatgcctctcaagtgaaaggagcaactggtgtc
agactagcattaattgcccaaaacgtagccaacctggggactggaattcttatatcatta
atttatggctggcagctgaccctgctgcttttagctgttgtgcccatcattgcggtggca
ggaatgattgaaatgaagatgttggctgggcatgctaagaaagataaacaagagctggaa
gctgcaggaaagattgccacagaagcaatagaaaatattagaactgttgttagcttgacc
cgagaaagaaaatttgagtcgatgtatggagaacatctgattgtaccatacagaaattct
gtgaagaaggcacatatatttggcttttgttttgccctttcacaagcaatgatgttcttt
acctacgccggctgtttccgctttggtgcctatctagtggtaaatggacacatggagtat
aaaagtgtatttttagtgttttcagcggttgtatttggtgcaatggcactaggacaaacc
agttcttttgctccagactatgccaaagccaagatatcagcagcccacttgtttctgctg
tttgaaagagtgccctcaatagacagttacagtgaggaaggagacaagcctgaaacattt
gagggaaacataacaatcaaagatgtggcatttaactacccaaaccgtccagaggtcaaa
atcctccaagggttgaatctaaaagtagaaaagggacaaactttggctcttgttggcagc
agtggctgtggaaagagcacagttgttcagctgctggagagattttacgacccactcgat
ggagaaatgctttttgatggcaaaactgcaaaggcactgaatatccagtggttgagagct
cagattggtatcgtctcacaagaaccaatcctgtttgacttcactattgccgaaaacatc
gcctatggagataacagtcggcaggtgtcccatgaggaaattgttagtgcagcaaaacag
gccaatattcattccttcattgactcactgccagataaatacaatacccgtgtaggggac
aagggaacgcagctttctggcggccagaagcagcgcattgccattgcccgagctctcgta
cgcaagccccaaattctgcttctggatgaagctacttctgccttagacacagaaagtgaa
aagattgtccaggaagcgctggataaggctcaagaaggtcgaacatgcatcgtgatagct
caccgcctgtccaccatccaaaacgctgacaagatcgccgtggtccagaacggcagggtc
atagagcagggcacccaccagcagctgctggctgaaaagggtgtctactattccctggtc
aatgttcaaagtgggtaa
DBGET
integrated database retrieval system
