Pyrgilauda ruficollis (rufous-necked snowfinch): 121353627
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Entry
121353627 CDS
T07608
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pruf01002
]
121353627 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121353627 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121353627 (USP13)
Enzymes [BR:
pruf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121353627 (USP13)
Peptidases and inhibitors [BR:
pruf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121353627 (USP13)
Ubiquitin system [BR:
pruf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121353627 (USP13)
Exosome [BR:
pruf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121353627 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
121353627
NCBI-ProteinID:
XP_041323537
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MQRAALFRGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVREKVPGASGGALPKRRNAKLFLDLEISSD
LNSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQEPDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCSRCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
MEHYRETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPLPELVRAKIPFSACL
QAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDISHLRARGLQPGEEELPDIAPPIVIPDDPKDHMTNNFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVIPAFGEVASSGAAALGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKATNNNLERALEWIFSHPDPEEESDPALDTMDMEN
NANANILAETGSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLRKEGRWVIYNDLRV
CASERPPKDLGYIYFYHRIPS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctcttccgcggcggcgatgcgcagatggccgccggggacctgggc
gagctgctggtcccctacatgcccacgatccgggtgcccaagtcaggggaccgggtctac
aagacggaatgtgccttctcctacgactcgcccgattcagaaggaggtctctacgtgtgc
atgaacacgtttctgggatttggaagggagcacatcgaacggcattaccggaagacggga
cagtgtgtctacctgcacctgaaacggcacgtgagagagaaggtaccaggagcatctggt
ggagctttacccaaaaggaggaatgctaagctatttttagatctggagataagcagtgat
ctcaacagtgatgactttgaatatgaggatgaagcaaaacttgtcatctttcctgatcac
tatgaaatctcattacccaacatagaagagctaccagcactggtgacgatagcttgtgat
gcactgctcagtgcaaaatcaccctacaggaagcaggaacctgactcctgggaagaagag
ctgcaggcatctaaacatgctaaaacacttgtacagttagacaatggtgttagaattccc
cccagtggttggaaatgctccaggtgtgacctgcgggagaacctgtggctgaacctgacg
gacggctccgtgctctgtgggaagtggttcttcgacggcagcgggggcaacgggcacgcc
atggagcactacagggagacaggctaccccctggcagtgaagctgggaaccatcactcct
gatggagcagatgtctattcctttgacgaagaggagccggttttagatccacatatagca
aaacacttggcacactttggaattgatatgctgcagatgcaagtgacagagaatgggcta
agagataatgacataaagccaagagtctcagaatgggaagtgattcaggaagctggtgtg
aaactcaagcccatgtatggcccaggatacactggcatgaagaacctggggaatagctgc
tacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccacgaatatttgactactcccctcttgatccaacacaagatttcaatact
cagatggctaaactgggacatggccttctttcaggccaatactctaagccacccatgaaa
tctgagctcattgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatct
cctcgaatgttcaaggcttttataagtaaaggccacccagagttttcctctaatagacaa
caagatgcacaggaatttttcctacatcttataaatctagtagagaggaaccccgtgggt
tcggagaaccccagcgatgtgttccggttcctggtggaggagcgcacgcagtgctgccag
tccaggaaggtgcgctacacggagagggtggactacatcatgcagctccctgtggccatg
gaggcagcaacaaacaaagatgaattaattgcctatgaactgaagaggcgagaagcagaa
gctgcaaggagacctctgccagagctggtccgtgccaagatcccatttagtgcttgtctg
caggccttttctgaaccaagcaacgtagaggatttctggagcagtgcccttcaagcaaaa
tctgcaggagttaaaacttcccgttttgcttcctttcctgagtacttagtggtgcagata
aagaaattcacctttggccttgactggatacccaaaaagcttgatgtttccattgacatg
ccagatttcctggatatcagtcaccttcgggccagggggctccagccaggagaagaggaa
ctcccagacattgctcctcccattgtcattcctgatgaccctaaagatcacatgacgaac
aatttcgtggagtccctagatattgatgagtcttcagttatgcagctggcagagatgggc
tttcctttggaagcatgtcggaaggctgtgtactatacaggcaacctgggtgctgaagtt
gctttcaactggatcattgcacacatggaagaaccagacttcgctgagccattggtcata
cctgcatttggagaagttgcttccagtggggcagctgctttaggagctgtagggttagat
aaccagcctcctgaagagatggttgcaattatcatttccatgggattccaaaggaatctg
gcaattcaggcactgaaggcaacaaacaacaacttggagcgtgcactggagtggatcttc
agccaccctgaccctgaggaagaaagtgaccctgctttggacacaatggatatggagaac
aatgctaatgccaatatccttgcagagacagggtcagagggacccaggatcaaagatggc
cctggaaggtatgagctgtttgggttcatcagccacatgggaacatccacaatgagtggc
cactacgtttgtcacctcagaaaggaaggaagatgggtgatctacaacgaccttagagtc
tgtgcctcagaacgacctcccaaagacctgggctacatttatttttaccacaggatacca
agttag
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