Pyrgilauda ruficollis (rufous-necked snowfinch): 121361347
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Entry
121361347 CDS
T07608
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121361347 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pruf03041
]
121361347 (DDX46)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121361347 (DDX46)
Spliceosome [BR:
pruf03041
]
Complex A
U2 snRNP components
U2 related factors
121361347 (DDX46)
Complex B
121361347 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
121361347
NCBI-ProteinID:
XP_041337892
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRKREDRRSRSRDRDRRRERSRSRDKRRSRS
RDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKAENRSRSKEK
TEGVEISKEKKKDKDDKEEEKDKDATTNAVATENFDQNKLEEEMRKRKERVEKWREEQRK
KAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVK
EEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSS
EEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLE
LEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIA
KTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRV
VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFD
MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQH
VIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQY
DRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNK
GYAYTFITEDQARYAGDIIKALELSGNPIPSDLEKLWADFKDQQKAEGKLIKKSSGFSGK
GFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTS
NAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVMVPFHFKDVMQQATNAILRGGTIQA
PTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWK
VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL
IKEELIRLQNSYQPTNKGRYKVL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcgagtccaggcattatcggaagcgctctgcgtcccgggggcgctccgggagc
cgttccaggagccgttccccgtcggacaagaggaagcgcgaggacaggcgctccaggagc
cgggaccgggatcgcaggcgcgagaggtcgcgcagcagggacaagagaagatctcgctcg
cgggacagaaagcgtcaaagacgttcaaggagtagagaaagggaacggagccgagagaga
agacgatcccggagccgagagaggaggcgctcaaggagcaggagtagagggagacggtct
cgatcctccagtccaagcaagaacaggaaagcagaaaacagatccagatctaaagaaaag
acagaaggcgtggaaatttccaaagaaaagaaaaaagacaaagatgacaaagaggaagag
aaagataaagatgctaccacaaatgctgtggccactgagaattttgatcagaacaaacta
gaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagagcaacgcaag
aaagcaatggaaaacataggagagctaaaaaaagaaattgaagagatgaaacaggggaaa
aaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaagaa
ggcaatgaggttgaagatgaggagttagatcctttagatgcttatatggaagaagtaaaa
gaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaaaagaaa
actggaccaactgttaccaaggtggtaactgtggtgacaaccaaaaaggcagctgctgag
tcagaaaagaagaaaggggagctcatggagaatgaccaagatgcaatggagtattcttca
gaagaggaggaggttgaccttcagactgccctgactggctatcagaccaagcagagaaag
ctgctagaaccagtggatcatggaaagatagaatatgaacctttcaggaaaaacttctat
gttgaagtaccagaactagctaaaatgactcaagaagaggtcaatgtgtacaggctggag
ctggagggaattactgtcaagggaaaaggctgtcccaaaccaataaaaacctgggtacaa
tgtggtatttccatgaagattctcactgccctcaaaaaacatggctatgagaagcccact
ccgattcaaacccaggctatcccagcaattatgaacggacgggatttgatcggcattgct
aaaacaggaagtggaaaaactattgcatttctgttgcccatgttcagacacattatggat
cagagagcattagaagaaggagaaggtcccatagctgtcattatgacacctacacgtgag
ttggctttgcagattaccaaggagtgcaagaaattctcaaagacacttgggcttcgagtt
gtctgtgtttatggaggaacaggaatcagtgaacagatagctgaactcaaaagaggtgct
gaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgg
gtgacaaacctccgtagagtcacatatgttgtacttgatgaagctgacagaatgtttgac
atgggctttgagcctcaggtcatgcgcattgtagacaacgtcaggcctgatcgtcagact
gtcatgttctctgctactttccccagagctatggaggccctggcgcgcaggatcctcagt
aaacccatagaggtgcaggttggaggcagaagtgtggtctgttctgatgtggagcaacac
gtgattgtcatagaagaggagaacaaatttctgaagttactggagctactgggacattat
caggagaaaggatctgttatcatatttgtagataagcaagaacatgctgatgggttgttg
aaagatttaatgagggcctcttatccttgcttgtctctccatggaggtattgatcagtat
gacagggacagcatcattaatgacttcaagaatggaacttgcaaacttctggtggccaca
tctgtagcagcgaggggcttggatgtgaagcagctgatgctggtggtcaattacagctgt
cccaaccactatgaggactatgtgcaccgagcaggccgcactgggcgagctggcaataaa
gggtatgcatataccttcattactgaggatcaggcacgttatgctggtgatatcattaag
gctttggaattgtctggaaatccaattccttctgatttggagaagctctgggctgacttc
aaagaccagcagaaggctgagggaaagctgattaaaaaaagcagtggattctctggcaaa
ggttttaaatttgatgaaacagaacaagctttggctaatgaaagaaagaagctacaaaaa
gcagctcttggcttgcaagattcagatgatgaagatacagctgttgatattgatgaacaa
attgaaagcatgttcaactcaaagaaaagagtaaaagacatggcagcaccaggaacatca
aatgctcctacaccatcagctgggaatgcagaaaaactggaaattgctaaaagattggct
ttgagaatcaatgcccagaagaatcttggagcagaggcacaagtcatggttcccttccat
tttaaggatgtgatgcagcaggctacaaatgctatcctgagaggaggcacaattcaagct
cctactgtgtctgccaagaccattgcagagcaactggctgagaaaatcaatgccaagctc
aattatgtacccatagagaagcaggaggaagagaaacaggatggaggacagaacgaatcc
ttcaagagatatgaagaagaattagagatcaatgacttcccacagactgccagatggaaa
gttacctccaaagaagcactgcagagaatcagtgaatattctgaagctgccattacaatc
aggggaacttacttccctccaggcaaagaacccaaggaaggagaacgaaagatttatttg
gctatagaaagtgccaatgaacttgctgtacagaaagcaaaggcagaaatcacacgactt
ataaaagaggagctcatcagattgcaaaattcttaccaaccaaccaacaaaggaagatac
aaagttctatga
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integrated database retrieval system
